GCC Code Coverage Report

Directory: ./
File: openvdb/openvdb/tree/Tree.h
Date: 2022-07-25 17:40:05
Exec Total Coverage
Lines: 223 323 69.0%
Functions: 689 1969 35.0%
Branches: 3135 12987 24.1%
Line Branch Exec Source
1 // Copyright Contributors to the OpenVDB Project
2 // SPDX-License-Identifier: MPL-2.0
3
4 /// @file tree/Tree.h
5
6 #ifndef OPENVDB_TREE_TREE_HAS_BEEN_INCLUDED
7 #define OPENVDB_TREE_TREE_HAS_BEEN_INCLUDED
8
9 #include <openvdb/Types.h>
10 #include <openvdb/Metadata.h>
11 #include <openvdb/math/Math.h>
12 #include <openvdb/math/BBox.h>
13 #include <openvdb/tools/Count.h> // tools::countActiveVoxels(), tools::memUsage(), tools::minMax()
14 #include <openvdb/util/Formats.h>
15 #include <openvdb/util/logging.h>
16 #include <openvdb/Platform.h>
17 #include "RootNode.h"
18 #include "InternalNode.h"
19 #include "LeafNode.h"
20 #include "TreeIterator.h"
21 #include "ValueAccessor.h"
22 #include <tbb/concurrent_hash_map.h>
23 #include <cstdint>
24 #include <iostream>
25 #include <mutex>
26 #include <sstream>
27 #include <vector>
28
29
30 namespace openvdb {
31 OPENVDB_USE_VERSION_NAMESPACE
32 namespace OPENVDB_VERSION_NAME {
33 namespace tree {
34
35 /// @brief Base class for typed trees
36 class OPENVDB_API TreeBase
37 {
38 public:
39 using Ptr = SharedPtr<TreeBase>;
40 using ConstPtr = SharedPtr<const TreeBase>;
41
42 TreeBase() = default;
43 5391 TreeBase(const TreeBase&) = default;
44 TreeBase& operator=(const TreeBase&) = delete; // disallow assignment
45 virtual ~TreeBase() = default;
46
47 /// Return the name of this tree's type.
48 virtual const Name& type() const = 0;
49
50 /// Return the name of the type of a voxel's value (e.g., "float" or "vec3d").
51 virtual Name valueType() const = 0;
52
53 /// Return @c true if this tree is of the same type as the template parameter.
54 template<typename TreeType>
55 2 bool isType() const { return (this->type() == TreeType::treeType()); }
56
57 /// Return a pointer to a deep copy of this tree
58 virtual TreeBase::Ptr copy() const = 0;
59
60 //
61 // Tree methods
62 //
63 /// @brief Return this tree's background value wrapped as metadata.
64 /// @note Query the metadata object for the value's type.
65 ✗ virtual Metadata::Ptr getBackgroundValue() const { return Metadata::Ptr(); }
66
67 /// @brief Return in @a bbox the axis-aligned bounding box of all
68 /// active tiles and leaf nodes with active values.
69 /// @details This is faster than calling evalActiveVoxelBoundingBox,
70 /// which visits the individual active voxels, and hence
71 /// evalLeafBoundingBox produces a less tight, i.e. approximate, bbox.
72 /// @return @c false if the bounding box is empty (in which case
73 /// the bbox is set to its default value).
74 virtual bool evalLeafBoundingBox(CoordBBox& bbox) const = 0;
75
76 /// @brief Return in @a dim the dimensions of the axis-aligned bounding box
77 /// of all leaf nodes.
78 /// @return @c false if the bounding box is empty.
79 virtual bool evalLeafDim(Coord& dim) const = 0;
80
81 /// @brief Return in @a bbox the axis-aligned bounding box of all
82 /// active voxels and tiles.
83 /// @details This method produces a more accurate, i.e. tighter,
84 /// bounding box than evalLeafBoundingBox which is approximate but
85 /// faster.
86 /// @return @c false if the bounding box is empty (in which case
87 /// the bbox is set to its default value).
88 virtual bool evalActiveVoxelBoundingBox(CoordBBox& bbox) const = 0;
89
90 /// @brief Return in @a dim the dimensions of the axis-aligned bounding box of all
91 /// active voxels. This is a tighter bounding box than the leaf node bounding box.
92 /// @return @c false if the bounding box is empty.
93 virtual bool evalActiveVoxelDim(Coord& dim) const = 0;
94
95 virtual void getIndexRange(CoordBBox& bbox) const = 0;
96
97 /// @brief Replace with background tiles any nodes whose voxel buffers
98 /// have not yet been allocated.
99 /// @details Typically, unallocated nodes are leaf nodes whose voxel buffers
100 /// are not yet resident in memory because delayed loading is in effect.
101 /// @sa readNonresidentBuffers, io::File::open
102 virtual void clipUnallocatedNodes() = 0;
103 /// Return the total number of unallocated leaf nodes residing in this tree.
104 virtual Index32 unallocatedLeafCount() const = 0;
105
106
107 //
108 // Statistics
109 //
110 /// @brief Return the depth of this tree.
111 ///
112 /// A tree with only a root node and leaf nodes has depth 2, for example.
113 virtual Index treeDepth() const = 0;
114 /// Return the number of leaf nodes.
115 virtual Index32 leafCount() const = 0;
116 /// Return a vector with node counts. The number of nodes of type NodeType
117 /// is given as element NodeType::LEVEL in the return vector. Thus, the size
118 /// of this vector corresponds to the height (or depth) of this tree.
119 virtual std::vector<Index32> nodeCount() const = 0;
120 /// Return the number of non-leaf nodes.
121 virtual Index32 nonLeafCount() const = 0;
122 /// Return the number of active voxels stored in leaf nodes.
123 virtual Index64 activeLeafVoxelCount() const = 0;
124 /// Return the number of inactive voxels stored in leaf nodes.
125 virtual Index64 inactiveLeafVoxelCount() const = 0;
126 /// Return the total number of active voxels.
127 virtual Index64 activeVoxelCount() const = 0;
128 /// Return the number of inactive voxels within the bounding box of all active voxels.
129 virtual Index64 inactiveVoxelCount() const = 0;
130 /// Return the total number of active tiles.
131 virtual Index64 activeTileCount() const = 0;
132
133 /// Return the total amount of memory in bytes occupied by this tree.
134 ✗ virtual Index64 memUsage() const { return 0; }
135
136
137 //
138 // I/O methods
139 //
140 /// @brief Read the tree topology from a stream.
141 ///
142 /// This will read the tree structure and tile values, but not voxel data.
143 virtual void readTopology(std::istream&, bool saveFloatAsHalf = false);
144 /// @brief Write the tree topology to a stream.
145 ///
146 /// This will write the tree structure and tile values, but not voxel data.
147 virtual void writeTopology(std::ostream&, bool saveFloatAsHalf = false) const;
148
149 /// Read all data buffers for this tree.
150 virtual void readBuffers(std::istream&, bool saveFloatAsHalf = false) = 0;
151 /// Read all of this tree's data buffers that intersect the given bounding box.
152 virtual void readBuffers(std::istream&, const CoordBBox&, bool saveFloatAsHalf = false) = 0;
153 /// @brief Read all of this tree's data buffers that are not yet resident in memory
154 /// (because delayed loading is in effect).
155 /// @details If this tree was read from a memory-mapped file, this operation
156 /// disconnects the tree from the file.
157 /// @sa clipUnallocatedNodes, io::File::open, io::MappedFile
158 virtual void readNonresidentBuffers() const = 0;
159 /// Write out all the data buffers for this tree.
160 virtual void writeBuffers(std::ostream&, bool saveFloatAsHalf = false) const = 0;
161
162 /// @brief Print statistics, memory usage and other information about this tree.
163 /// @param os a stream to which to write textual information
164 /// @param verboseLevel 1: print tree configuration only;
165 /// 2: include node and voxel statistics;
166 /// 3: include memory usage;
167 /// 4: include minimum and maximum voxel values
168 /// @warning @a verboseLevel 4 forces loading of any unallocated nodes.
169 virtual void print(std::ostream& os = std::cout, int verboseLevel = 1) const;
170 };
171
172
173 ////////////////////////////////////////
174
175
176 template<typename _RootNodeType>
177 class Tree: public TreeBase
178 {
179 public:
180 using Ptr = SharedPtr<Tree>;
181 using ConstPtr = SharedPtr<const Tree>;
182
183 using RootNodeType = _RootNodeType;
184 using ValueType = typename RootNodeType::ValueType;
185 using BuildType = typename RootNodeType::BuildType;
186 using LeafNodeType = typename RootNodeType::LeafNodeType;
187
188 static const Index DEPTH = RootNodeType::LEVEL + 1;
189
190 /// @brief ValueConverter<T>::Type is the type of a tree having the same
191 /// hierarchy as this tree but a different value type, T.
192 ///
193 /// For example, FloatTree::ValueConverter<double>::Type is equivalent to DoubleTree.
194 /// @note If the source tree type is a template argument, it might be necessary
195 /// to write "typename SourceTree::template ValueConverter<T>::Type".
196 template<typename OtherValueType>
197 struct ValueConverter {
198 using Type = Tree<typename RootNodeType::template ValueConverter<OtherValueType>::Type>;
199 };
200
201
202 43572 Tree() {}
203
204 Tree& operator=(const Tree&) = delete; // disallow assignment
205
206 /// Deep copy constructor
207 4556 Tree(const Tree& other): TreeBase(other), mRoot(other.mRoot)
208 {
209 4556 }
210
211 /// @brief Value conversion deep copy constructor
212 ///
213 /// Deep copy a tree of the same configuration as this tree type but a different
214 /// ValueType, casting the other tree's values to this tree's ValueType.
215 /// @throw TypeError if the other tree's configuration doesn't match this tree's
216 /// or if this tree's ValueType is not constructible from the other tree's ValueType.
217 template<typename OtherRootType>
218 752 explicit Tree(const Tree<OtherRootType>& other): TreeBase(other), mRoot(other.root())
219 {
220 748 }
221
222 /// @brief Topology copy constructor from a tree of a different type
223 ///
224 /// Copy the structure, i.e., the active states of tiles and voxels, of another
225 /// tree of a possibly different type, but don't copy any tile or voxel values.
226 /// Instead, initialize tiles and voxels with the given active and inactive values.
227 /// @param other a tree having (possibly) a different ValueType
228 /// @param inactiveValue background value for this tree, and the value to which
229 /// all inactive tiles and voxels are initialized
230 /// @param activeValue value to which active tiles and voxels are initialized
231 /// @throw TypeError if the other tree's configuration doesn't match this tree's.
232 template<typename OtherTreeType>
233 21 Tree(const OtherTreeType& other,
234 const ValueType& inactiveValue,
235 const ValueType& activeValue,
236 TopologyCopy):
237 TreeBase(other),
238 21 mRoot(other.root(), inactiveValue, activeValue, TopologyCopy())
239 {
240 21 }
241
242 /// @brief Topology copy constructor from a tree of a different type
243 ///
244 /// @note This topology copy constructor is generally faster than
245 /// the one that takes both a foreground and a background value.
246 ///
247 /// Copy the structure, i.e., the active states of tiles and voxels, of another
248 /// tree of a possibly different type, but don't copy any tile or voxel values.
249 /// Instead, initialize tiles and voxels with the given background value.
250 /// @param other a tree having (possibly) a different ValueType
251 /// @param background the value to which tiles and voxels are initialized
252 /// @throw TypeError if the other tree's configuration doesn't match this tree's.
253 template<typename OtherTreeType>
254 3583 Tree(const OtherTreeType& other, const ValueType& background, TopologyCopy):
255 TreeBase(other),
256 3583 mRoot(other.root(), background, TopologyCopy())
257 {
258 3583 }
259
260 /// Empty tree constructor
261 47122 Tree(const ValueType& background): mRoot(background) {}
262
263 196798 ~Tree() override { this->clear(); releaseAllAccessors(); }
264
265 /// Return a pointer to a deep copy of this tree
266
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 7988 TreeBase::Ptr copy() const override { return TreeBase::Ptr(new Tree(*this)); }
267
268 /// Return the name of the type of a voxel's value (e.g., "float" or "vec3d")
269 19930 Name valueType() const override { return typeNameAsString<ValueType>(); }
270
271 /// Return the name of this type of tree.
272 static const Name& treeType();
273 /// Return the name of this type of tree.
274 384 const Name& type() const override { return this->treeType(); }
275
276 bool operator==(const Tree&) const { OPENVDB_THROW(NotImplementedError, ""); }
277 bool operator!=(const Tree&) const { OPENVDB_THROW(NotImplementedError, ""); }
278
279 //@{
280 /// Return this tree's root node.
281
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 26735959 RootNodeType& root() { return mRoot; }
282
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 706956794 const RootNodeType& root() const { return mRoot; }
283 //@}
284
285
286 //
287 // Tree methods
288 //
289 /// @brief Return @c true if the given tree has the same node and active value
290 /// topology as this tree, whether or not it has the same @c ValueType.
291 template<typename OtherRootNodeType>
292 bool hasSameTopology(const Tree<OtherRootNodeType>& other) const;
293
294 bool evalLeafBoundingBox(CoordBBox& bbox) const override;
295 bool evalActiveVoxelBoundingBox(CoordBBox& bbox) const override;
296 bool evalActiveVoxelDim(Coord& dim) const override;
297 bool evalLeafDim(Coord& dim) const override;
298
299 /// @brief Traverse the type hierarchy of nodes, and return, in @a dims, a list
300 /// of the Log2Dims of nodes in order from RootNode to LeafNode.
301 /// @note Because RootNodes are resizable, the RootNode Log2Dim is 0 for all trees.
302 static void getNodeLog2Dims(std::vector<Index>& dims);
303
304
305 //
306 // I/O methods
307 //
308 /// @brief Read the tree topology from a stream.
309 ///
310 /// This will read the tree structure and tile values, but not voxel data.
311 void readTopology(std::istream&, bool saveFloatAsHalf = false) override;
312 /// @brief Write the tree topology to a stream.
313 ///
314 /// This will write the tree structure and tile values, but not voxel data.
315 void writeTopology(std::ostream&, bool saveFloatAsHalf = false) const override;
316 /// Read all data buffers for this tree.
317 void readBuffers(std::istream&, bool saveFloatAsHalf = false) override;
318 /// Read all of this tree's data buffers that intersect the given bounding box.
319 void readBuffers(std::istream&, const CoordBBox&, bool saveFloatAsHalf = false) override;
320 /// @brief Read all of this tree's data buffers that are not yet resident in memory
321 /// (because delayed loading is in effect).
322 /// @details If this tree was read from a memory-mapped file, this operation
323 /// disconnects the tree from the file.
324 /// @sa clipUnallocatedNodes, io::File::open, io::MappedFile
325 void readNonresidentBuffers() const override;
326 /// Write out all data buffers for this tree.
327 void writeBuffers(std::ostream&, bool saveFloatAsHalf = false) const override;
328
329 void print(std::ostream& os = std::cout, int verboseLevel = 1) const override;
330
331
332 //
333 // Statistics
334 //
335 /// @brief Return the depth of this tree.
336 ///
337 /// A tree with only a root node and leaf nodes has depth 2, for example.
338 18 Index treeDepth() const override { return DEPTH; }
339 /// Return the number of leaf nodes.
340
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 60270 Index32 leafCount() const override { return mRoot.leafCount(); }
341 /// Return a vector with node counts. The number of nodes of type NodeType
342 /// is given as element NodeType::LEVEL in the return vector. Thus, the size
343 /// of this vector corresponds to the height (or depth) of this tree.
344 6 std::vector<Index32> nodeCount() const override
345 {
346 6 std::vector<Index32> vec(DEPTH, 0);
347
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 6 mRoot.nodeCount( vec );
348 6 return vec;// Named Return Value Optimization
349 }
350 /// Return the number of non-leaf nodes.
351
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 357 Index32 nonLeafCount() const override { return mRoot.nonLeafCount(); }
352 /// Return the number of active voxels stored in leaf nodes.
353
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 15 Index64 activeLeafVoxelCount() const override { return tools::countActiveLeafVoxels(*this); }
354 /// Return the number of inactive voxels stored in leaf nodes.
355
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 4 Index64 inactiveLeafVoxelCount() const override { return tools::countInactiveLeafVoxels(*this); }
356 /// Return the total number of active voxels.
357
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 12064 Index64 activeVoxelCount() const override { return tools::countActiveVoxels(*this); }
358 /// Return the number of inactive voxels within the bounding box of all active voxels.
359
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 4 Index64 inactiveVoxelCount() const override { return tools::countInactiveVoxels(*this); }
360 /// Return the total number of active tiles.
361
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 301 Index64 activeTileCount() const override { return tools::countActiveTiles(*this); }
362
363 /// Return the minimum and maximum active values in this tree.
364 OPENVDB_DEPRECATED_MESSAGE("Switch to tools::minMax. Use threaded = false for serial execution")
365 void evalMinMax(ValueType &min, ValueType &max) const;
366
367 350 Index64 memUsage() const override { return tools::memUsage(*this); }
368
369
370 //
371 // Voxel access methods (using signed indexing)
372 //
373 /// Return the value of the voxel at the given coordinates.
374 const ValueType& getValue(const Coord& xyz) const;
375 /// @brief Return the value of the voxel at the given coordinates
376 /// and update the given accessor's node cache.
377 template<typename AccessT> const ValueType& getValue(const Coord& xyz, AccessT&) const;
378
379 /// @brief Return the tree depth (0 = root) at which the value of voxel (x, y, z) resides.
380 /// @details If (x, y, z) isn't explicitly represented in the tree (i.e., it is
381 /// implicitly a background voxel), return -1.
382 int getValueDepth(const Coord& xyz) const;
383
384 /// Set the active state of the voxel at the given coordinates but don't change its value.
385 void setActiveState(const Coord& xyz, bool on);
386 /// Set the value of the voxel at the given coordinates but don't change its active state.
387 void setValueOnly(const Coord& xyz, const ValueType& value);
388 /// Mark the voxel at the given coordinates as active but don't change its value.
389 void setValueOn(const Coord& xyz);
390 /// Set the value of the voxel at the given coordinates and mark the voxel as active.
391 void setValueOn(const Coord& xyz, const ValueType& value);
392 /// Set the value of the voxel at the given coordinates and mark the voxel as active.
393 void setValue(const Coord& xyz, const ValueType& value);
394 /// @brief Set the value of the voxel at the given coordinates, mark the voxel as active,
395 /// and update the given accessor's node cache.
396 template<typename AccessT> void setValue(const Coord& xyz, const ValueType& value, AccessT&);
397 /// Mark the voxel at the given coordinates as inactive but don't change its value.
398 void setValueOff(const Coord& xyz);
399 /// Set the value of the voxel at the given coordinates and mark the voxel as inactive.
400 void setValueOff(const Coord& xyz, const ValueType& value);
401
402 /// @brief Apply a functor to the value of the voxel at the given coordinates
403 /// and mark the voxel as active.
404 /// @details Provided that the functor can be inlined, this is typically
405 /// significantly faster than calling getValue() followed by setValueOn().
406 /// @param xyz the coordinates of a voxel whose value is to be modified
407 /// @param op a functor of the form <tt>void op(ValueType&) const</tt> that modifies
408 /// its argument in place
409 /// @par Example:
410 /// @code
411 /// Coord xyz(1, 0, -2);
412 /// // Multiply the value of a voxel by a constant and mark the voxel as active.
413 /// floatTree.modifyValue(xyz, [](float& f) { f *= 0.25; }); // C++11
414 /// // Set the value of a voxel to the maximum of its current value and 0.25,
415 /// // and mark the voxel as active.
416 /// floatTree.modifyValue(xyz, [](float& f) { f = std::max(f, 0.25f); }); // C++11
417 /// @endcode
418 /// @note The functor is not guaranteed to be called only once.
419 /// @see tools::foreach()
420 template<typename ModifyOp>
421 void modifyValue(const Coord& xyz, const ModifyOp& op);
422
423 /// @brief Apply a functor to the voxel at the given coordinates.
424 /// @details Provided that the functor can be inlined, this is typically
425 /// significantly faster than calling getValue() followed by setValue().
426 /// @param xyz the coordinates of a voxel to be modified
427 /// @param op a functor of the form <tt>void op(ValueType&, bool&) const</tt> that
428 /// modifies its arguments, a voxel's value and active state, in place
429 /// @par Example:
430 /// @code
431 /// Coord xyz(1, 0, -2);
432 /// // Multiply the value of a voxel by a constant and mark the voxel as inactive.
433 /// floatTree.modifyValueAndActiveState(xyz,
434 /// [](float& f, bool& b) { f *= 0.25; b = false; }); // C++11
435 /// // Set the value of a voxel to the maximum of its current value and 0.25,
436 /// // but don't change the voxel's active state.
437 /// floatTree.modifyValueAndActiveState(xyz,
438 /// [](float& f, bool&) { f = std::max(f, 0.25f); }); // C++11
439 /// @endcode
440 /// @note The functor is not guaranteed to be called only once.
441 /// @see tools::foreach()
442 template<typename ModifyOp>
443 void modifyValueAndActiveState(const Coord& xyz, const ModifyOp& op);
444
445 /// @brief Get the value of the voxel at the given coordinates.
446 /// @return @c true if the value is active.
447 bool probeValue(const Coord& xyz, ValueType& value) const;
448
449 /// Return @c true if the value at the given coordinates is active.
450 32744488 bool isValueOn(const Coord& xyz) const { return mRoot.isValueOn(xyz); }
451 /// Return @c true if the value at the given coordinates is inactive.
452
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 212650 bool isValueOff(const Coord& xyz) const { return !this->isValueOn(xyz); }
453 /// Return @c true if this tree has any active tiles.
454
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 9085 bool hasActiveTiles() const { return mRoot.hasActiveTiles(); }
455
456 /// Set all voxels that lie outside the given axis-aligned box to the background.
457 void clip(const CoordBBox&);
458 /// @brief Replace with background tiles any nodes whose voxel buffers
459 /// have not yet been allocated.
460 /// @details Typically, unallocated nodes are leaf nodes whose voxel buffers
461 /// are not yet resident in memory because delayed loading is in effect.
462 /// @sa readNonresidentBuffers, io::File::open
463 void clipUnallocatedNodes() override;
464
465 /// Return the total number of unallocated leaf nodes residing in this tree.
466 Index32 unallocatedLeafCount() const override;
467
468 //@{
469 /// @brief Set all voxels within a given axis-aligned box to a constant value.
470 /// @param bbox inclusive coordinates of opposite corners of an axis-aligned box
471 /// @param value the value to which to set voxels within the box
472 /// @param active if true, mark voxels within the box as active,
473 /// otherwise mark them as inactive
474 /// @note This operation generates a sparse, but not always optimally sparse,
475 /// representation of the filled box. Follow fill operations with a prune()
476 /// operation for optimal sparseness.
477 void sparseFill(const CoordBBox& bbox, const ValueType& value, bool active = true);
478 void fill(const CoordBBox& bbox, const ValueType& value, bool active = true)
479 {
480 this->sparseFill(bbox, value, active);
481 183 }
482 //@}
483
484 /// @brief Set all voxels within a given axis-aligned box to a constant value
485 /// and ensure that those voxels are all represented at the leaf level.
486 /// @param bbox inclusive coordinates of opposite corners of an axis-aligned box.
487 /// @param value the value to which to set voxels within the box.
488 /// @param active if true, mark voxels within the box as active,
489 /// otherwise mark them as inactive.
490 /// @sa voxelizeActiveTiles()
491 void denseFill(const CoordBBox& bbox, const ValueType& value, bool active = true);
492
493 /// @brief Densify active tiles, i.e., replace them with leaf-level active voxels.
494 ///
495 /// @param threaded if true, this operation is multi-threaded (over the internal nodes).
496 ///
497 /// @warning This method can explode the tree's memory footprint, especially if it
498 /// contains active tiles at the upper levels (in particular the root level)!
499 ///
500 /// @sa denseFill()
501 void voxelizeActiveTiles(bool threaded = true);
502
503 /// @brief Reduce the memory footprint of this tree by replacing with tiles
504 /// any nodes whose values are all the same (optionally to within a tolerance)
505 /// and have the same active state.
506 /// @warning Will soon be deprecated!
507 23 void prune(const ValueType& tolerance = zeroVal<ValueType>())
508 {
509
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 35 this->clearAllAccessors();
510
13/962
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 35 mRoot.prune(tolerance);
511 33 }
512
513 /// @brief Add the given leaf node to this tree, creating a new branch if necessary.
514 /// If a leaf node with the same origin already exists, replace it.
515 ///
516 /// @warning Ownership of the leaf is transferred to the tree so
517 /// the client code should not attempt to delete the leaf pointer!
518
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 72163 void addLeaf(LeafNodeType* leaf) { assert(leaf); mRoot.addLeaf(leaf); }
519
520 /// @brief Add a tile containing voxel (x, y, z) at the specified tree level,
521 /// creating a new branch if necessary. Delete any existing lower-level nodes
522 /// that contain (x, y, z).
523 /// @note @a level must be less than this tree's depth.
524 void addTile(Index level, const Coord& xyz, const ValueType& value, bool active);
525
526 /// @brief Return a pointer to the node of type @c NodeT that contains voxel (x, y, z)
527 /// and replace it with a tile of the specified value and state.
528 /// If no such node exists, leave the tree unchanged and return @c nullptr.
529 /// @note The caller takes ownership of the node and is responsible for deleting it.
530 template<typename NodeT>
531 NodeT* stealNode(const Coord& xyz, const ValueType& value, bool active);
532
533 /// @brief Return a pointer to the leaf node that contains voxel (x, y, z).
534 /// If no such node exists, create one that preserves the values and
535 /// active states of all voxels.
536 /// @details Use this method to preallocate a static tree topology over which to
537 /// safely perform multithreaded processing.
538 LeafNodeType* touchLeaf(const Coord& xyz);
539
540 //@{
541 /// @brief Return a pointer to the node of type @c NodeType that contains
542 /// voxel (x, y, z). If no such node exists, return @c nullptr.
543 template<typename NodeType> NodeType* probeNode(const Coord& xyz);
544 template<typename NodeType> const NodeType* probeConstNode(const Coord& xyz) const;
545 template<typename NodeType> const NodeType* probeNode(const Coord& xyz) const;
546 //@}
547
548 //@{
549 /// @brief Return a pointer to the leaf node that contains voxel (x, y, z).
550 /// If no such node exists, return @c nullptr.
551 LeafNodeType* probeLeaf(const Coord& xyz);
552 const LeafNodeType* probeConstLeaf(const Coord& xyz) const;
553 const LeafNodeType* probeLeaf(const Coord& xyz) const { return this->probeConstLeaf(xyz); }
554 //@}
555
556 //@{
557 /// @brief Adds all nodes of a certain type to a container with the following API:
558 /// @code
559 /// struct ArrayT {
560 /// using value_type = ...; // the type of node to be added to the array
561 /// void push_back(value_type nodePtr); // add a node to the array
562 /// };
563 /// @endcode
564 /// @details An example of a wrapper around a c-style array is:
565 /// @code
566 /// struct MyArray {
567 /// using value_type = LeafType*;
568 /// value_type* ptr;
569 /// MyArray(value_type* array) : ptr(array) {}
570 /// void push_back(value_type leaf) { *ptr++ = leaf; }
571 ///};
572 /// @endcode
573 /// @details An example that constructs a list of pointer to all leaf nodes is:
574 /// @code
575 /// std::vector<const LeafNodeType*> array;//most std contains have the required API
576 /// array.reserve(tree.leafCount());//this is a fast preallocation.
577 /// tree.getNodes(array);
578 /// @endcode
579
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 40422 template<typename ArrayT> void getNodes(ArrayT& array) { mRoot.getNodes(array); }
580
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 867 template<typename ArrayT> void getNodes(ArrayT& array) const { mRoot.getNodes(array); }
581 //@}
582
583 /// @brief Steals all nodes of a certain type from the tree and
584 /// adds them to a container with the following API:
585 /// @code
586 /// struct ArrayT {
587 /// using value_type = ...; // the type of node to be added to the array
588 /// void push_back(value_type nodePtr); // add a node to the array
589 /// };
590 /// @endcode
591 /// @details An example of a wrapper around a c-style array is:
592 /// @code
593 /// struct MyArray {
594 /// using value_type = LeafType*;
595 /// value_type* ptr;
596 /// MyArray(value_type* array) : ptr(array) {}
597 /// void push_back(value_type leaf) { *ptr++ = leaf; }
598 ///};
599 /// @endcode
600 /// @details An example that constructs a list of pointer to all leaf nodes is:
601 /// @code
602 /// std::vector<const LeafNodeType*> array;//most std contains have the required API
603 /// array.reserve(tree.leafCount());//this is a fast preallocation.
604 /// tree.stealNodes(array);
605 /// @endcode
606 template<typename ArrayT>
607
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 179032 void stealNodes(ArrayT& array) { this->clearAllAccessors(); mRoot.stealNodes(array); }
608 template<typename ArrayT>
609 void stealNodes(ArrayT& array, const ValueType& value, bool state)
610 {
611
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 2 this->clearAllAccessors();
612
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 2 mRoot.stealNodes(array, value, state);
613 2 }
614
615 //
616 // Aux methods
617 //
618 /// @brief Return @c true if this tree contains no nodes other than
619 /// the root node and no tiles other than background tiles.
620 743 bool empty() const { return mRoot.empty(); }
621
622 /// Remove all tiles from this tree and all nodes other than the root node.
623 void clear();
624
625 /// Clear all registered accessors.
626 void clearAllAccessors();
627
628 //@{
629 /// @brief Register an accessor for this tree. Registered accessors are
630 /// automatically cleared whenever one of this tree's nodes is deleted.
631 void attachAccessor(ValueAccessorBase<Tree, true>&) const;
632 void attachAccessor(ValueAccessorBase<const Tree, true>&) const;
633 //@}
634
635 //@{
636 /// Dummy implementations
637 void attachAccessor(ValueAccessorBase<Tree, false>&) const {}
638 void attachAccessor(ValueAccessorBase<const Tree, false>&) const {}
639 //@}
640
641 //@{
642 /// Deregister an accessor so that it is no longer automatically cleared.
643 void releaseAccessor(ValueAccessorBase<Tree, true>&) const;
644 void releaseAccessor(ValueAccessorBase<const Tree, true>&) const;
645 //@}
646
647 //@{
648 /// Dummy implementations
649 void releaseAccessor(ValueAccessorBase<Tree, false>&) const {}
650 void releaseAccessor(ValueAccessorBase<const Tree, false>&) const {}
651 //@}
652
653 /// @brief Return this tree's background value wrapped as metadata.
654 /// @note Query the metadata object for the value's type.
655 Metadata::Ptr getBackgroundValue() const override;
656
657 /// @brief Return this tree's background value.
658 ///
659 /// @note Use tools::changeBackground to efficiently modify the
660 /// background values. Else use tree.root().setBackground, which
661 /// is serial and hence slower.
662 const ValueType& background() const { return mRoot.background(); }
663
664 /// Min and max are both inclusive.
665 3 void getIndexRange(CoordBBox& bbox) const override { mRoot.getIndexRange(bbox); }
666
667 /// @brief Efficiently merge another tree into this tree using one of several schemes.
668 /// @details This operation is primarily intended to combine trees that are mostly
669 /// non-overlapping (for example, intermediate trees from computations that are
670 /// parallelized across disjoint regions of space).
671 /// @note This operation is not guaranteed to produce an optimally sparse tree.
672 /// Follow merge() with prune() for optimal sparseness.
673 /// @warning This operation always empties the other tree.
674 void merge(Tree& other, MergePolicy = MERGE_ACTIVE_STATES);
675
676 /// @brief Union this tree's set of active values with the active values
677 /// of the other tree, whose @c ValueType may be different.
678 /// @details The resulting state of a value is active if the corresponding value
679 /// was already active OR if it is active in the other tree. Also, a resulting
680 /// value maps to a voxel if the corresponding value already mapped to a voxel
681 /// OR if it is a voxel in the other tree. Thus, a resulting value can only
682 /// map to a tile if the corresponding value already mapped to a tile
683 /// AND if it is a tile value in other tree.
684 ///
685 /// @note This operation modifies only active states, not values.
686 /// Specifically, active tiles and voxels in this tree are not changed, and
687 /// tiles or voxels that were inactive in this tree but active in the other tree
688 /// are marked as active in this tree but left with their original values.
689 ///
690 /// @note If preserveTiles is true, any active tile in this topology
691 /// will not be densified by overlapping child topology.
692 template<typename OtherRootNodeType>
693 void topologyUnion(const Tree<OtherRootNodeType>& other, const bool preserveTiles = false);
694
695 /// @brief Intersects this tree's set of active values with the active values
696 /// of the other tree, whose @c ValueType may be different.
697 /// @details The resulting state of a value is active only if the corresponding
698 /// value was already active AND if it is active in the other tree. Also, a
699 /// resulting value maps to a voxel if the corresponding value
700 /// already mapped to an active voxel in either of the two grids
701 /// and it maps to an active tile or voxel in the other grid.
702 ///
703 /// @note This operation can delete branches in this grid if they
704 /// overlap with inactive tiles in the other grid. Likewise active
705 /// voxels can be turned into inactive voxels resulting in leaf
706 /// nodes with no active values. Thus, it is recommended to
707 /// subsequently call tools::pruneInactive.
708 template<typename OtherRootNodeType>
709 void topologyIntersection(const Tree<OtherRootNodeType>& other);
710
711 /// @brief Difference this tree's set of active values with the active values
712 /// of the other tree, whose @c ValueType may be different. So a
713 /// resulting voxel will be active only if the original voxel is
714 /// active in this tree and inactive in the other tree.
715 ///
716 /// @note This operation can delete branches in this grid if they
717 /// overlap with active tiles in the other grid. Likewise active
718 /// voxels can be turned into inactive voxels resulting in leaf
719 /// nodes with no active values. Thus, it is recommended to
720 /// subsequently call tools::pruneInactive.
721 template<typename OtherRootNodeType>
722 void topologyDifference(const Tree<OtherRootNodeType>& other);
723
724 /// For a given function @c f, use sparse traversal to compute <tt>f(this, other)</tt>
725 /// over all corresponding pairs of values (tile or voxel) of this tree and the other tree
726 /// and store the result in this tree.
727 /// This method is typically more space-efficient than the two-tree combine2(),
728 /// since it moves rather than copies nodes from the other tree into this tree.
729 /// @note This operation always empties the other tree.
730 /// @param other a tree of the same type as this tree
731 /// @param op a functor of the form <tt>void op(const T& a, const T& b, T& result)</tt>,
732 /// where @c T is this tree's @c ValueType, that computes
733 /// <tt>result = f(a, b)</tt>
734 /// @param prune if true, prune the resulting tree one branch at a time (this is usually
735 /// more space-efficient than pruning the entire tree in one pass)
736 ///
737 /// @par Example:
738 /// Compute the per-voxel difference between two floating-point trees,
739 /// @c aTree and @c bTree, and store the result in @c aTree (leaving @c bTree empty).
740 /// @code
741 /// {
742 /// struct Local {
743 /// static inline void diff(const float& a, const float& b, float& result) {
744 /// result = a - b;
745 /// }
746 /// };
747 /// aTree.combine(bTree, Local::diff);
748 /// }
749 /// @endcode
750 ///
751 /// @par Example:
752 /// Compute <tt>f * a + (1 - f) * b</tt> over all voxels of two floating-point trees,
753 /// @c aTree and @c bTree, and store the result in @c aTree (leaving @c bTree empty).
754 /// @code
755 /// namespace {
756 /// struct Blend {
757 /// Blend(float f): frac(f) {}
758 /// inline void operator()(const float& a, const float& b, float& result) const {
759 /// result = frac * a + (1.0 - frac) * b;
760 /// }
761 /// float frac;
762 /// };
763 /// }
764 /// {
765 /// aTree.combine(bTree, Blend(0.25)); // 0.25 * a + 0.75 * b
766 /// }
767 /// @endcode
768 template<typename CombineOp>
769 void combine(Tree& other, CombineOp& op, bool prune = false);
770 #ifndef _WIN32
771 template<typename CombineOp>
772 void combine(Tree& other, const CombineOp& op, bool prune = false);
773 #endif
774
775 /// Like combine(), but with
776 /// @param other a tree of the same type as this tree
777 /// @param op a functor of the form <tt>void op(CombineArgs<ValueType>& args)</tt> that
778 /// computes <tt>args.setResult(f(args.a(), args.b()))</tt> and, optionally,
779 /// <tt>args.setResultIsActive(g(args.aIsActive(), args.bIsActive()))</tt>
780 /// for some functions @c f and @c g
781 /// @param prune if true, prune the resulting tree one branch at a time (this is usually
782 /// more space-efficient than pruning the entire tree in one pass)
783 ///
784 /// This variant passes not only the @em a and @em b values but also the active states
785 /// of the @em a and @em b values to the functor, which may then return, by calling
786 /// @c args.setResultIsActive(), a computed active state for the result value.
787 /// By default, the result is active if either the @em a or the @em b value is active.
788 ///
789 /// @see openvdb/Types.h for the definition of the CombineArgs struct.
790 ///
791 /// @par Example:
792 /// Replace voxel values in floating-point @c aTree with corresponding values
793 /// from floating-point @c bTree (leaving @c bTree empty) wherever the @c bTree
794 /// values are larger. Also, preserve the active states of any transferred values.
795 /// @code
796 /// {
797 /// struct Local {
798 /// static inline void max(CombineArgs<float>& args) {
799 /// if (args.b() > args.a()) {
800 /// // Transfer the B value and its active state.
801 /// args.setResult(args.b());
802 /// args.setResultIsActive(args.bIsActive());
803 /// } else {
804 /// // Preserve the A value and its active state.
805 /// args.setResult(args.a());
806 /// args.setResultIsActive(args.aIsActive());
807 /// }
808 /// }
809 /// };
810 /// aTree.combineExtended(bTree, Local::max);
811 /// }
812 /// @endcode
813 template<typename ExtendedCombineOp>
814 void combineExtended(Tree& other, ExtendedCombineOp& op, bool prune = false);
815 #ifndef _WIN32
816 template<typename ExtendedCombineOp>
817 void combineExtended(Tree& other, const ExtendedCombineOp& op, bool prune = false);
818 #endif
819
820 /// For a given function @c f, use sparse traversal to compute <tt>f(a, b)</tt> over all
821 /// corresponding pairs of values (tile or voxel) of trees A and B and store the result
822 /// in this tree.
823 /// @param a,b two trees with the same configuration (levels and node dimensions)
824 /// as this tree but with the B tree possibly having a different value type
825 /// @param op a functor of the form <tt>void op(const T1& a, const T2& b, T1& result)</tt>,
826 /// where @c T1 is this tree's and the A tree's @c ValueType and @c T2 is the
827 /// B tree's @c ValueType, that computes <tt>result = f(a, b)</tt>
828 /// @param prune if true, prune the resulting tree one branch at a time (this is usually
829 /// more space-efficient than pruning the entire tree in one pass)
830 ///
831 /// @throw TypeError if the B tree's configuration doesn't match this tree's
832 /// or if this tree's ValueType is not constructible from the B tree's ValueType.
833 ///
834 /// @par Example:
835 /// Compute the per-voxel difference between two floating-point trees,
836 /// @c aTree and @c bTree, and store the result in a third tree.
837 /// @code
838 /// {
839 /// struct Local {
840 /// static inline void diff(const float& a, const float& b, float& result) {
841 /// result = a - b;
842 /// }
843 /// };
844 /// FloatTree resultTree;
845 /// resultTree.combine2(aTree, bTree, Local::diff);
846 /// }
847 /// @endcode
848 template<typename CombineOp, typename OtherTreeType /*= Tree*/>
849 void combine2(const Tree& a, const OtherTreeType& b, CombineOp& op, bool prune = false);
850 #ifndef _WIN32
851 template<typename CombineOp, typename OtherTreeType /*= Tree*/>
852 void combine2(const Tree& a, const OtherTreeType& b, const CombineOp& op, bool prune = false);
853 #endif
854
855 /// Like combine2(), but with
856 /// @param a,b two trees with the same configuration (levels and node dimensions)
857 /// as this tree but with the B tree possibly having a different value type
858 /// @param op a functor of the form <tt>void op(CombineArgs<T1, T2>& args)</tt>, where
859 /// @c T1 is this tree's and the A tree's @c ValueType and @c T2 is the B tree's
860 /// @c ValueType, that computes <tt>args.setResult(f(args.a(), args.b()))</tt>
861 /// and, optionally,
862 /// <tt>args.setResultIsActive(g(args.aIsActive(), args.bIsActive()))</tt>
863 /// for some functions @c f and @c g
864 /// @param prune if true, prune the resulting tree one branch at a time (this is usually
865 /// more space-efficient than pruning the entire tree in one pass)
866 /// This variant passes not only the @em a and @em b values but also the active states
867 /// of the @em a and @em b values to the functor, which may then return, by calling
868 /// <tt>args.setResultIsActive()</tt>, a computed active state for the result value.
869 /// By default, the result is active if either the @em a or the @em b value is active.
870 ///
871 /// @throw TypeError if the B tree's configuration doesn't match this tree's
872 /// or if this tree's ValueType is not constructible from the B tree's ValueType.
873 ///
874 /// @see openvdb/Types.h for the definition of the CombineArgs struct.
875 ///
876 /// @par Example:
877 /// Compute the per-voxel maximum values of two single-precision floating-point trees,
878 /// @c aTree and @c bTree, and store the result in a third tree. Set the active state
879 /// of each output value to that of the larger of the two input values.
880 /// @code
881 /// {
882 /// struct Local {
883 /// static inline void max(CombineArgs<float>& args) {
884 /// if (args.b() > args.a()) {
885 /// // Transfer the B value and its active state.
886 /// args.setResult(args.b());
887 /// args.setResultIsActive(args.bIsActive());
888 /// } else {
889 /// // Preserve the A value and its active state.
890 /// args.setResult(args.a());
891 /// args.setResultIsActive(args.aIsActive());
892 /// }
893 /// }
894 /// };
895 /// FloatTree aTree = ...;
896 /// FloatTree bTree = ...;
897 /// FloatTree resultTree;
898 /// resultTree.combine2Extended(aTree, bTree, Local::max);
899 /// }
900 /// @endcode
901 ///
902 /// @par Example:
903 /// Compute the per-voxel maximum values of a double-precision and a single-precision
904 /// floating-point tree, @c aTree and @c bTree, and store the result in a third,
905 /// double-precision tree. Set the active state of each output value to that of
906 /// the larger of the two input values.
907 /// @code
908 /// {
909 /// struct Local {
910 /// static inline void max(CombineArgs<double, float>& args) {
911 /// if (args.b() > args.a()) {
912 /// // Transfer the B value and its active state.
913 /// args.setResult(args.b());
914 /// args.setResultIsActive(args.bIsActive());
915 /// } else {
916 /// // Preserve the A value and its active state.
917 /// args.setResult(args.a());
918 /// args.setResultIsActive(args.aIsActive());
919 /// }
920 /// }
921 /// };
922 /// DoubleTree aTree = ...;
923 /// FloatTree bTree = ...;
924 /// DoubleTree resultTree;
925 /// resultTree.combine2Extended(aTree, bTree, Local::max);
926 /// }
927 /// @endcode
928 template<typename ExtendedCombineOp, typename OtherTreeType /*= Tree*/>
929 void combine2Extended(const Tree& a, const OtherTreeType& b, ExtendedCombineOp& op,
930 bool prune = false);
931 #ifndef _WIN32
932 template<typename ExtendedCombineOp, typename OtherTreeType /*= Tree*/>
933 void combine2Extended(const Tree& a, const OtherTreeType& b, const ExtendedCombineOp&,
934 bool prune = false);
935 #endif
936
937 template<typename BBoxOp>
938 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
939
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 4 void visitActiveBBox(BBoxOp& op) const { mRoot.visitActiveBBox(op); }
940
941 template<typename VisitorOp>
942 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
943 void visit(VisitorOp& op);
944 template<typename VisitorOp>
945 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
946 void visit(const VisitorOp& op);
947
948 template<typename VisitorOp>
949 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
950 void visit(VisitorOp& op) const;
951 template<typename VisitorOp>
952 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
953 void visit(const VisitorOp& op) const;
954
955 template<typename OtherTreeType, typename VisitorOp>
956 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
957 void visit2(OtherTreeType& other, VisitorOp& op);
958 template<typename OtherTreeType, typename VisitorOp>
959 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
960 void visit2(OtherTreeType& other, const VisitorOp& op);
961
962 template<typename OtherTreeType, typename VisitorOp>
963 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
964 void visit2(OtherTreeType& other, VisitorOp& op) const;
965 template<typename OtherTreeType, typename VisitorOp>
966 OPENVDB_DEPRECATED_MESSAGE("Use tools::visitNodesDepthFirst or DynamicNodeManager instead")
967 void visit2(OtherTreeType& other, const VisitorOp& op) const;
968
969
970 //
971 // Iteration
972 //
973 //@{
974 /// Return an iterator over children of the root node.
975 typename RootNodeType::ChildOnCIter beginRootChildren() const { return mRoot.cbeginChildOn(); }
976 typename RootNodeType::ChildOnCIter cbeginRootChildren() const { return mRoot.cbeginChildOn(); }
977 typename RootNodeType::ChildOnIter beginRootChildren() { return mRoot.beginChildOn(); }
978 //@}
979
980 //@{
981 /// Return an iterator over non-child entries of the root node's table.
982 typename RootNodeType::ChildOffCIter beginRootTiles() const { return mRoot.cbeginChildOff(); }
983 typename RootNodeType::ChildOffCIter cbeginRootTiles() const { return mRoot.cbeginChildOff(); }
984 typename RootNodeType::ChildOffIter beginRootTiles() { return mRoot.beginChildOff(); }
985 //@}
986
987 //@{
988 /// Return an iterator over all entries of the root node's table.
989 typename RootNodeType::ChildAllCIter beginRootDense() const { return mRoot.cbeginChildAll(); }
990 typename RootNodeType::ChildAllCIter cbeginRootDense() const { return mRoot.cbeginChildAll(); }
991 typename RootNodeType::ChildAllIter beginRootDense() { return mRoot.beginChildAll(); }
992 //@}
993
994
995 //@{
996 /// Iterator over all nodes in this tree
997 using NodeIter = NodeIteratorBase<Tree, typename RootNodeType::ChildOnIter>;
998 using NodeCIter = NodeIteratorBase<const Tree, typename RootNodeType::ChildOnCIter>;
999 //@}
1000
1001 //@{
1002 /// Iterator over all leaf nodes in this tree
1003 using LeafIter = LeafIteratorBase<Tree, typename RootNodeType::ChildOnIter>;
1004 using LeafCIter = LeafIteratorBase<const Tree, typename RootNodeType::ChildOnCIter>;
1005 //@}
1006
1007 //@{
1008 /// Return an iterator over all nodes in this tree.
1009 NodeIter beginNode() { return NodeIter(*this); }
1010 NodeCIter beginNode() const { return NodeCIter(*this); }
1011 32 NodeCIter cbeginNode() const { return NodeCIter(*this); }
1012 //@}
1013
1014 //@{
1015 /// Return an iterator over all leaf nodes in this tree.
1016
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 311 LeafIter beginLeaf() { return LeafIter(*this); }
1017
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 255 LeafCIter beginLeaf() const { return LeafCIter(*this); }
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 13438 LeafCIter cbeginLeaf() const { return LeafCIter(*this); }
1019 //@}
1020
1021 using ValueAllIter = TreeValueIteratorBase<Tree, typename RootNodeType::ValueAllIter>;
1022 using ValueAllCIter = TreeValueIteratorBase<const Tree, typename RootNodeType::ValueAllCIter>;
1023 using ValueOnIter = TreeValueIteratorBase<Tree, typename RootNodeType::ValueOnIter>;
1024 using ValueOnCIter = TreeValueIteratorBase<const Tree, typename RootNodeType::ValueOnCIter>;
1025 using ValueOffIter = TreeValueIteratorBase<Tree, typename RootNodeType::ValueOffIter>;
1026 using ValueOffCIter = TreeValueIteratorBase<const Tree, typename RootNodeType::ValueOffCIter>;
1027
1028 //@{
1029 /// Return an iterator over all values (tile and voxel) across all nodes.
1030
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 1576 ValueAllIter beginValueAll() { return ValueAllIter(*this); }
1031 ValueAllCIter beginValueAll() const { return ValueAllCIter(*this); }
1032
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 112 ValueAllCIter cbeginValueAll() const { return ValueAllCIter(*this); }
1033 //@}
1034 //@{
1035 /// Return an iterator over active values (tile and voxel) across all nodes.
1036
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 21 ValueOnIter beginValueOn() { return ValueOnIter(*this); }
1037 ValueOnCIter beginValueOn() const { return ValueOnCIter(*this); }
1038
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 159 ValueOnCIter cbeginValueOn() const { return ValueOnCIter(*this); }
1039 //@}
1040 //@{
1041 /// Return an iterator over inactive values (tile and voxel) across all nodes.
1042
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 15 ValueOffIter beginValueOff() { return ValueOffIter(*this); }
1043 ValueOffCIter beginValueOff() const { return ValueOffCIter(*this); }
1044
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 28 ValueOffCIter cbeginValueOff() const { return ValueOffCIter(*this); }
1045 //@}
1046
1047 /// @brief Return an iterator of type @c IterT (for example, begin<ValueOnIter>() is
1048 /// equivalent to beginValueOn()).
1049 template<typename IterT> IterT begin();
1050 /// @brief Return a const iterator of type CIterT (for example, cbegin<ValueOnCIter>()
1051 /// is equivalent to cbeginValueOn()).
1052 template<typename CIterT> CIterT cbegin() const;
1053
1054
1055 protected:
1056 using AccessorRegistry = tbb::concurrent_hash_map<ValueAccessorBase<Tree, true>*, bool>;
1057 using ConstAccessorRegistry = tbb::concurrent_hash_map<ValueAccessorBase<const Tree, true>*, bool>;
1058
1059 /// @brief Notify all registered accessors, by calling ValueAccessor::release(),
1060 /// that this tree is about to be deleted.
1061 void releaseAllAccessors();
1062
1063 // TBB body object used to deallocates nodes in parallel.
1064 template<typename NodeType>
1065 struct DeallocateNodes {
1066
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 111872 DeallocateNodes(std::vector<NodeType*>& nodes)
1067
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 158372 : mNodes(nodes.empty() ? nullptr : &nodes.front()) { }
1068 471156 void operator()(const tbb::blocked_range<size_t>& range) const {
1069
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 50002900 for (size_t n = range.begin(), N = range.end(); n < N; ++n) {
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 53102886 delete mNodes[n]; mNodes[n] = nullptr;
1071 }
1072 471156 }
1073 NodeType ** const mNodes;
1074 };
1075
1076 //
1077 // Data members
1078 //
1079 RootNodeType mRoot; // root node of the tree
1080 mutable AccessorRegistry mAccessorRegistry;
1081 mutable ConstAccessorRegistry mConstAccessorRegistry;
1082
1083 static std::unique_ptr<const Name> sTreeTypeName;
1084 }; // end of Tree class
1085
1086 template<typename _RootNodeType>
1087 std::unique_ptr<const Name> Tree<_RootNodeType>::sTreeTypeName;
1088
1089
1090 /// @brief Tree3<T, N1, N2>::Type is the type of a three-level tree
1091 /// (Root, Internal, Leaf) with value type T and
1092 /// internal and leaf node log dimensions N1 and N2, respectively.
1093 /// @note This is NOT the standard tree configuration (Tree4 is).
1094 template<typename T, Index N1=4, Index N2=3>
1095 struct Tree3 {
1096 using Type = Tree<RootNode<InternalNode<LeafNode<T, N2>, N1>>>;
1097 };
1098
1099
1100 /// @brief Tree4<T, N1, N2, N3>::Type is the type of a four-level tree
1101 /// (Root, Internal, Internal, Leaf) with value type T and
1102 /// internal and leaf node log dimensions N1, N2 and N3, respectively.
1103 /// @note This is the standard tree configuration.
1104 template<typename T, Index N1=5, Index N2=4, Index N3=3>
1105 struct Tree4 {
1106 using Type = Tree<RootNode<InternalNode<InternalNode<LeafNode<T, N3>, N2>, N1>>>;
1107 };
1108
1109 /// @brief Tree5<T, N1, N2, N3, N4>::Type is the type of a five-level tree
1110 /// (Root, Internal, Internal, Internal, Leaf) with value type T and
1111 /// internal and leaf node log dimensions N1, N2, N3 and N4, respectively.
1112 /// @note This is NOT the standard tree configuration (Tree4 is).
1113 template<typename T, Index N1=6, Index N2=5, Index N3=4, Index N4=3>
1114 struct Tree5 {
1115 using Type =
1116 Tree<RootNode<InternalNode<InternalNode<InternalNode<LeafNode<T, N4>, N3>, N2>, N1>>>;
1117 };
1118
1119
1120 ////////////////////////////////////////
1121
1122
1123 inline void
1124 113 TreeBase::readTopology(std::istream& is, bool /*saveFloatAsHalf*/)
1125 {
1126 int32_t bufferCount;
1127 113 is.read(reinterpret_cast<char*>(&bufferCount), sizeof(int32_t));
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 113 if (bufferCount != 1) OPENVDB_LOG_WARN("multi-buffer trees are no longer supported");
1129 113 }
1130
1131
1132 inline void
1133 ✗ TreeBase::writeTopology(std::ostream& os, bool /*saveFloatAsHalf*/) const
1134 {
1135 150 int32_t bufferCount = 1;
1136 ✗ os.write(reinterpret_cast<char*>(&bufferCount), sizeof(int32_t));
1137 }
1138
1139
1140 inline void
1141 ✗ TreeBase::print(std::ostream& os, int /*verboseLevel*/) const
1142 {
1143 ✗ os << " Tree Type: " << type()
1144 ✗ << " Active Voxel Count: " << activeVoxelCount() << std::endl
1145 ✗ << " Active tile Count: " << activeTileCount() << std::endl
1146 ✗ << " Inactive Voxel Count: " << inactiveVoxelCount() << std::endl
1147 ✗ << " Leaf Node Count: " << leafCount() << std::endl
1148 ✗ << " Non-leaf Node Count: " << nonLeafCount() << std::endl;
1149 }
1150
1151
1152 ////////////////////////////////////////
1153
1154
1155 //
1156 // Type traits for tree iterators
1157 //
1158
1159 /// @brief TreeIterTraits provides, for all tree iterators, a begin(tree) function
1160 /// that returns an iterator over a tree of arbitrary type.
1161 template<typename TreeT, typename IterT> struct TreeIterTraits;
1162
1163 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::RootNodeType::ChildOnIter> {
1164 static typename TreeT::RootNodeType::ChildOnIter begin(TreeT& tree) {
1165 return tree.beginRootChildren();
1166 }
1167 };
1168
1169 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::RootNodeType::ChildOnCIter> {
1170 static typename TreeT::RootNodeType::ChildOnCIter begin(const TreeT& tree) {
1171 return tree.cbeginRootChildren();
1172 }
1173 };
1174
1175 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::RootNodeType::ChildOffIter> {
1176 static typename TreeT::RootNodeType::ChildOffIter begin(TreeT& tree) {
1177 return tree.beginRootTiles();
1178 }
1179 };
1180
1181 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::RootNodeType::ChildOffCIter> {
1182 static typename TreeT::RootNodeType::ChildOffCIter begin(const TreeT& tree) {
1183 return tree.cbeginRootTiles();
1184 }
1185 };
1186
1187 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::RootNodeType::ChildAllIter> {
1188 static typename TreeT::RootNodeType::ChildAllIter begin(TreeT& tree) {
1189 return tree.beginRootDense();
1190 }
1191 };
1192
1193 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::RootNodeType::ChildAllCIter> {
1194 static typename TreeT::RootNodeType::ChildAllCIter begin(const TreeT& tree) {
1195 return tree.cbeginRootDense();
1196 }
1197 };
1198
1199 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::NodeIter> {
1200 static typename TreeT::NodeIter begin(TreeT& tree) { return tree.beginNode(); }
1201 };
1202
1203 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::NodeCIter> {
1204 static typename TreeT::NodeCIter begin(const TreeT& tree) { return tree.cbeginNode(); }
1205 };
1206
1207 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::LeafIter> {
1208 static typename TreeT::LeafIter begin(TreeT& tree) { return tree.beginLeaf(); }
1209 };
1210
1211 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::LeafCIter> {
1212 static typename TreeT::LeafCIter begin(const TreeT& tree) { return tree.cbeginLeaf(); }
1213 };
1214
1215 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::ValueOnIter> {
1216 static typename TreeT::ValueOnIter begin(TreeT& tree) { return tree.beginValueOn(); }
1217 };
1218
1219 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::ValueOnCIter> {
1220 static typename TreeT::ValueOnCIter begin(const TreeT& tree) { return tree.cbeginValueOn(); }
1221 };
1222
1223 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::ValueOffIter> {
1224 static typename TreeT::ValueOffIter begin(TreeT& tree) { return tree.beginValueOff(); }
1225 };
1226
1227 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::ValueOffCIter> {
1228 static typename TreeT::ValueOffCIter begin(const TreeT& tree) { return tree.cbeginValueOff(); }
1229 };
1230
1231 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::ValueAllIter> {
1232 static typename TreeT::ValueAllIter begin(TreeT& tree) { return tree.beginValueAll(); }
1233 };
1234
1235 template<typename TreeT> struct TreeIterTraits<TreeT, typename TreeT::ValueAllCIter> {
1236 static typename TreeT::ValueAllCIter begin(const TreeT& tree) { return tree.cbeginValueAll(); }
1237 };
1238
1239
1240 template<typename RootNodeType>
1241 template<typename IterT>
1242 inline IterT
1243 Tree<RootNodeType>::begin()
1244 {
1245 1 return TreeIterTraits<Tree, IterT>::begin(*this);
1246 }
1247
1248
1249 template<typename RootNodeType>
1250 template<typename IterT>
1251 inline IterT
1252 Tree<RootNodeType>::cbegin() const
1253 {
1254 return TreeIterTraits<Tree, IterT>::begin(*this);
1255 }
1256
1257
1258 ////////////////////////////////////////
1259
1260
1261 template<typename RootNodeType>
1262 void
1263 226 Tree<RootNodeType>::readTopology(std::istream& is, bool saveFloatAsHalf)
1264 {
1265 226 this->clearAllAccessors();
1266 226 TreeBase::readTopology(is, saveFloatAsHalf);
1267 226 mRoot.readTopology(is, saveFloatAsHalf);
1268 }
1269
1270
1271 template<typename RootNodeType>
1272 void
1273 300 Tree<RootNodeType>::writeTopology(std::ostream& os, bool saveFloatAsHalf) const
1274 {
1275 300 TreeBase::writeTopology(os, saveFloatAsHalf);
1276 300 mRoot.writeTopology(os, saveFloatAsHalf);
1277 }
1278
1279
1280 template<typename RootNodeType>
1281 inline void
1282 528 Tree<RootNodeType>::readBuffers(std::istream &is, bool saveFloatAsHalf)
1283 {
1284 528 this->clearAllAccessors();
1285 528 mRoot.readBuffers(is, saveFloatAsHalf);
1286 }
1287
1288
1289 template<typename RootNodeType>
1290 inline void
1291 8 Tree<RootNodeType>::readBuffers(std::istream &is, const CoordBBox& bbox, bool saveFloatAsHalf)
1292 {
1293 8 this->clearAllAccessors();
1294 8 mRoot.readBuffers(is, bbox, saveFloatAsHalf);
1295 }
1296
1297
1298 template<typename RootNodeType>
1299 inline void
1300 ✗ Tree<RootNodeType>::readNonresidentBuffers() const
1301 {
1302 ✗ for (LeafCIter it = this->cbeginLeaf(); it; ++it) {
1303 // Retrieving the value of a leaf voxel forces loading of the leaf node's voxel buffer.
1304 it->getValue(Index(0));
1305 }
1306 }
1307
1308
1309 template<typename RootNodeType>
1310 inline void
1311 518 Tree<RootNodeType>::writeBuffers(std::ostream &os, bool saveFloatAsHalf) const
1312 {
1313 518 mRoot.writeBuffers(os, saveFloatAsHalf);
1314 }
1315
1316
1317 template<typename RootNodeType>
1318 inline void
1319
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 97852 Tree<RootNodeType>::clear()
1320 {
1321 std::vector<LeafNodeType*> leafnodes;
1322 this->stealNodes(leafnodes);
1323
1324
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 97852 tbb::parallel_for(tbb::blocked_range<size_t>(0, leafnodes.size()),
1325 DeallocateNodes<LeafNodeType>(leafnodes));
1326
1327 std::vector<typename RootNodeType::ChildNodeType*> internalNodes;
1328 this->stealNodes(internalNodes);
1329
1330
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 97852 tbb::parallel_for(tbb::blocked_range<size_t>(0, internalNodes.size()),
1331 DeallocateNodes<typename RootNodeType::ChildNodeType>(internalNodes));
1332
1333 97852 mRoot.clear();
1334
1335
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 97852 this->clearAllAccessors();
1336 97852 }
1337
1338
1339 ////////////////////////////////////////
1340
1341
1342 template<typename RootNodeType>
1343 inline void
1344
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 9925360 Tree<RootNodeType>::attachAccessor(ValueAccessorBase<Tree, true>& accessor) const
1345 {
1346 typename AccessorRegistry::accessor a;
1347
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 9925360 mAccessorRegistry.insert(a, &accessor);
1348 9925360 }
1349
1350
1351 template<typename RootNodeType>
1352 inline void
1353
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 640937 Tree<RootNodeType>::attachAccessor(ValueAccessorBase<const Tree, true>& accessor) const
1354 {
1355 typename ConstAccessorRegistry::accessor a;
1356
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 640937 mConstAccessorRegistry.insert(a, &accessor);
1357 640937 }
1358
1359
1360 template<typename RootNodeType>
1361 inline void
1362 Tree<RootNodeType>::releaseAccessor(ValueAccessorBase<Tree, true>& accessor) const
1363 {
1364 4970360 mAccessorRegistry.erase(&accessor);
1365 4970360 }
1366
1367
1368 template<typename RootNodeType>
1369 inline void
1370 Tree<RootNodeType>::releaseAccessor(ValueAccessorBase<const Tree, true>& accessor) const
1371 {
1372 279142 mConstAccessorRegistry.erase(&accessor);
1373 279142 }
1374
1375
1376 template<typename RootNodeType>
1377 inline void
1378 462187 Tree<RootNodeType>::clearAllAccessors()
1379 {
1380 462187 for (typename AccessorRegistry::iterator it = mAccessorRegistry.begin();
1381
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 488423 it != mAccessorRegistry.end(); ++it)
1382 {
1383
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 13118 if (it->first) it->first->clear();
1384 }
1385
1386 462187 for (typename ConstAccessorRegistry::iterator it = mConstAccessorRegistry.begin();
1387
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 462403 it != mConstAccessorRegistry.end(); ++it)
1388 {
1389
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 108 if (it->first) it->first->clear();
1390 }
1391 462187 }
1392
1393
1394 template<typename RootNodeType>
1395 inline void
1396 90879 Tree<RootNodeType>::releaseAllAccessors()
1397 {
1398 90879 mAccessorRegistry.erase(nullptr);
1399 for (typename AccessorRegistry::iterator it = mAccessorRegistry.begin();
1400
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 92663 it != mAccessorRegistry.end(); ++it)
1401 {
1402 892 it->first->release();
1403 }
1404 90879 mAccessorRegistry.clear();
1405
1406 90879 mAccessorRegistry.erase(nullptr);
1407 90879 for (typename ConstAccessorRegistry::iterator it = mConstAccessorRegistry.begin();
1408
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 90947 it != mConstAccessorRegistry.end(); ++it)
1409 {
1410 34 it->first->release();
1411 }
1412 90879 mConstAccessorRegistry.clear();
1413 90879 }
1414
1415
1416 ////////////////////////////////////////
1417
1418
1419 template<typename RootNodeType>
1420 inline const typename RootNodeType::ValueType&
1421 Tree<RootNodeType>::getValue(const Coord& xyz) const
1422 {
1423
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 21536580 return mRoot.getValue(xyz);
1424 }
1425
1426
1427 template<typename RootNodeType>
1428 template<typename AccessT>
1429 inline const typename RootNodeType::ValueType&
1430 Tree<RootNodeType>::getValue(const Coord& xyz, AccessT& accessor) const
1431 {
1432 return accessor.getValue(xyz);
1433 }
1434
1435
1436 template<typename RootNodeType>
1437 inline int
1438 Tree<RootNodeType>::getValueDepth(const Coord& xyz) const
1439 {
1440 310015 return mRoot.getValueDepth(xyz);
1441 }
1442
1443
1444 template<typename RootNodeType>
1445 inline void
1446 Tree<RootNodeType>::setValueOff(const Coord& xyz)
1447 {
1448
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 36 mRoot.setValueOff(xyz);
1449 36 }
1450
1451
1452 template<typename RootNodeType>
1453 inline void
1454 Tree<RootNodeType>::setValueOff(const Coord& xyz, const ValueType& value)
1455 {
1456
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 162 mRoot.setValueOff(xyz, value);
1457 162 }
1458
1459
1460 template<typename RootNodeType>
1461 inline void
1462 Tree<RootNodeType>::setActiveState(const Coord& xyz, bool on)
1463 {
1464
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 4 mRoot.setActiveState(xyz, on);
1465 4 }
1466
1467
1468 template<typename RootNodeType>
1469 inline void
1470 Tree<RootNodeType>::setValue(const Coord& xyz, const ValueType& value)
1471 {
1472
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 316242 mRoot.setValueOn(xyz, value);
1473 316242 }
1474
1475 template<typename RootNodeType>
1476 inline void
1477 Tree<RootNodeType>::setValueOnly(const Coord& xyz, const ValueType& value)
1478 {
1479
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 16 mRoot.setValueOnly(xyz, value);
1480 16 }
1481
1482 template<typename RootNodeType>
1483 template<typename AccessT>
1484 inline void
1485 Tree<RootNodeType>::setValue(const Coord& xyz, const ValueType& value, AccessT& accessor)
1486 {
1487 accessor.setValue(xyz, value);
1488 }
1489
1490
1491 template<typename RootNodeType>
1492 inline void
1493 Tree<RootNodeType>::setValueOn(const Coord& xyz)
1494 {
1495
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 30 mRoot.setActiveState(xyz, true);
1496 30 }
1497
1498
1499 template<typename RootNodeType>
1500 inline void
1501 Tree<RootNodeType>::setValueOn(const Coord& xyz, const ValueType& value)
1502 {
1503
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 257 mRoot.setValueOn(xyz, value);
1504 257 }
1505
1506
1507 template<typename RootNodeType>
1508 template<typename ModifyOp>
1509 inline void
1510 Tree<RootNodeType>::modifyValue(const Coord& xyz, const ModifyOp& op)
1511 {
1512
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 7 mRoot.modifyValue(xyz, op);
1513 1 }
1514
1515
1516 template<typename RootNodeType>
1517 template<typename ModifyOp>
1518 inline void
1519 Tree<RootNodeType>::modifyValueAndActiveState(const Coord& xyz, const ModifyOp& op)
1520 {
1521
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 4 mRoot.modifyValueAndActiveState(xyz, op);
1522 4 }
1523
1524
1525 template<typename RootNodeType>
1526 inline bool
1527 Tree<RootNodeType>::probeValue(const Coord& xyz, ValueType& value) const
1528 {
1529 3595 return mRoot.probeValue(xyz, value);
1530 }
1531
1532
1533 ////////////////////////////////////////
1534
1535
1536 template<typename RootNodeType>
1537 inline void
1538 Tree<RootNodeType>::addTile(Index level, const Coord& xyz,
1539 const ValueType& value, bool active)
1540 {
1541
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 10640 mRoot.addTile(level, xyz, value, active);
1542 10639 }
1543
1544
1545 template<typename RootNodeType>
1546 template<typename NodeT>
1547 inline NodeT*
1548 Tree<RootNodeType>::stealNode(const Coord& xyz, const ValueType& value, bool active)
1549 {
1550 22771 this->clearAllAccessors();
1551 22771 return mRoot.template stealNode<NodeT>(xyz, value, active);
1552 }
1553
1554
1555 template<typename RootNodeType>
1556 inline typename RootNodeType::LeafNodeType*
1557 Tree<RootNodeType>::touchLeaf(const Coord& xyz)
1558 {
1559
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 3926 return mRoot.touchLeaf(xyz);
1560 }
1561
1562
1563 template<typename RootNodeType>
1564 inline typename RootNodeType::LeafNodeType*
1565 Tree<RootNodeType>::probeLeaf(const Coord& xyz)
1566 {
1567 38028 return mRoot.probeLeaf(xyz);
1568 }
1569
1570
1571 template<typename RootNodeType>
1572 inline const typename RootNodeType::LeafNodeType*
1573 Tree<RootNodeType>::probeConstLeaf(const Coord& xyz) const
1574 {
1575 77978 return mRoot.probeConstLeaf(xyz);
1576 }
1577
1578
1579 template<typename RootNodeType>
1580 template<typename NodeType>
1581 inline NodeType*
1582 Tree<RootNodeType>::probeNode(const Coord& xyz)
1583 {
1584 3475 return mRoot.template probeNode<NodeType>(xyz);
1585 }
1586
1587
1588 template<typename RootNodeType>
1589 template<typename NodeType>
1590 inline const NodeType*
1591 Tree<RootNodeType>::probeNode(const Coord& xyz) const
1592 {
1593 return this->template probeConstNode<NodeType>(xyz);
1594 }
1595
1596
1597 template<typename RootNodeType>
1598 template<typename NodeType>
1599 inline const NodeType*
1600 Tree<RootNodeType>::probeConstNode(const Coord& xyz) const
1601 {
1602 13504 return mRoot.template probeConstNode<NodeType>(xyz);
1603 }
1604
1605
1606 ////////////////////////////////////////
1607
1608
1609 template<typename RootNodeType>
1610 inline void
1611 Tree<RootNodeType>::clip(const CoordBBox& bbox)
1612 {
1613
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 7 this->clearAllAccessors();
1614
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 7 return mRoot.clip(bbox);
1615 }
1616
1617
1618 template<typename RootNodeType>
1619 inline void
1620 ✗ Tree<RootNodeType>::clipUnallocatedNodes()
1621 {
1622 ✗ this->clearAllAccessors();
1623 ✗ for (LeafIter it = this->beginLeaf(); it; ) {
1624 const LeafNodeType* leaf = it.getLeaf();
1625 ++it; // advance the iterator before deleting the leaf node
1626 ✗ if (!leaf->isAllocated()) {
1627 this->addTile(/*level=*/0, leaf->origin(), this->background(), /*active=*/false);
1628 }
1629 }
1630 }
1631
1632 template<typename RootNodeType>
1633 inline Index32
1634 4 Tree<RootNodeType>::unallocatedLeafCount() const
1635 {
1636 Index32 sum = 0;
1637
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 12 for (auto it = this->cbeginLeaf(); it; ++it) if (!it->isAllocated()) ++sum;
1638 4 return sum;
1639 }
1640
1641
1642 template<typename RootNodeType>
1643 inline void
1644 Tree<RootNodeType>::sparseFill(const CoordBBox& bbox, const ValueType& value, bool active)
1645 {
1646
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 669 this->clearAllAccessors();
1647
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 569 return mRoot.sparseFill(bbox, value, active);
1648 }
1649
1650
1651 template<typename RootNodeType>
1652 inline void
1653 Tree<RootNodeType>::denseFill(const CoordBBox& bbox, const ValueType& value, bool active)
1654 {
1655
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1656
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 3464 return mRoot.denseFill(bbox, value, active);
1657 }
1658
1659
1660 template<typename RootNodeType>
1661 inline void
1662 Tree<RootNodeType>::voxelizeActiveTiles(bool threaded)
1663 {
1664
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 984 mRoot.voxelizeActiveTiles(threaded);
1666 219 }
1667
1668
1669 template<typename RootNodeType>
1670 Metadata::Ptr
1671 ✗ Tree<RootNodeType>::getBackgroundValue() const
1672 {
1673 ✗ Metadata::Ptr result;
1674 ✗ if (Metadata::isRegisteredType(valueType())) {
1675 using MetadataT = TypedMetadata<ValueType>;
1676 ✗ result = Metadata::createMetadata(valueType());
1677 ✗ if (result->typeName() == MetadataT::staticTypeName()) {
1678 MetadataT* m = static_cast<MetadataT*>(result.get());
1679 ✗ m->value() = mRoot.background();
1680 }
1681 }
1682 ✗ return result;
1683 }
1684
1685
1686 ////////////////////////////////////////
1687
1688
1689 template<typename RootNodeType>
1690 inline void
1691 17999 Tree<RootNodeType>::merge(Tree& other, MergePolicy policy)
1692 {
1693 17999 this->clearAllAccessors();
1694 17999 other.clearAllAccessors();
1695
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 17999 switch (policy) {
1696 17985 case MERGE_ACTIVE_STATES:
1697 17985 mRoot.template merge<MERGE_ACTIVE_STATES>(other.mRoot); break;
1698 4 case MERGE_NODES:
1699 4 mRoot.template merge<MERGE_NODES>(other.mRoot); break;
1700 10 case MERGE_ACTIVE_STATES_AND_NODES:
1701 10 mRoot.template merge<MERGE_ACTIVE_STATES_AND_NODES>(other.mRoot); break;
1702 }
1703 17999 }
1704
1705
1706 template<typename RootNodeType>
1707 template<typename OtherRootNodeType>
1708 inline void
1709 Tree<RootNodeType>::topologyUnion(const Tree<OtherRootNodeType>& other, const bool preserveTiles)
1710 {
1711
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1712
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 12224 mRoot.topologyUnion(other.root(), preserveTiles);
1713 5094 }
1714
1715 template<typename RootNodeType>
1716 template<typename OtherRootNodeType>
1717 inline void
1718 Tree<RootNodeType>::topologyIntersection(const Tree<OtherRootNodeType>& other)
1719 {
1720
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 295 mRoot.topologyIntersection(other.root());
1722 41 }
1723
1724 template<typename RootNodeType>
1725 template<typename OtherRootNodeType>
1726 inline void
1727 Tree<RootNodeType>::topologyDifference(const Tree<OtherRootNodeType>& other)
1728 {
1729
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 42 this->clearAllAccessors();
1730
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 42 mRoot.topologyDifference(other.root());
1731 36 }
1732
1733 ////////////////////////////////////////
1734
1735
1736 /// @brief Helper class to adapt a three-argument (a, b, result) CombineOp functor
1737 /// into a single-argument functor that accepts a CombineArgs struct
1738 template<typename AValueT, typename CombineOp, typename BValueT = AValueT>
1739 struct CombineOpAdapter
1740 {
1741 8 CombineOpAdapter(CombineOp& _op): op(_op) {}
1742
1743 void operator()(CombineArgs<AValueT, BValueT>& args) const {
1744
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 224250 op(args.a(), args.b(), args.result());
1745 4 }
1746
1747 CombineOp& op;
1748 };
1749
1750
1751 template<typename RootNodeType>
1752 template<typename CombineOp>
1753 inline void
1754 Tree<RootNodeType>::combine(Tree& other, CombineOp& op, bool prune)
1755 {
1756 CombineOpAdapter<ValueType, CombineOp> extendedOp(op);
1757 this->combineExtended(other, extendedOp, prune);
1758 }
1759
1760
1761 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1762 /// code like this: <tt>aTree.combine(bTree, MyCombineOp(...))</tt>.
1763 #ifndef _WIN32
1764 template<typename RootNodeType>
1765 template<typename CombineOp>
1766 inline void
1767 Tree<RootNodeType>::combine(Tree& other, const CombineOp& op, bool prune)
1768 {
1769 CombineOpAdapter<ValueType, const CombineOp> extendedOp(op);
1770 this->combineExtended(other, extendedOp, prune);
1771 }
1772 #endif
1773
1774
1775 template<typename RootNodeType>
1776 template<typename ExtendedCombineOp>
1777 inline void
1778 Tree<RootNodeType>::combineExtended(Tree& other, ExtendedCombineOp& op, bool prune)
1779 {
1780 4 this->clearAllAccessors();
1781 4 mRoot.combine(other.root(), op, prune);
1782 }
1783
1784
1785 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1786 /// code like this: <tt>aTree.combineExtended(bTree, MyCombineOp(...))</tt>.
1787 #ifndef _WIN32
1788 template<typename RootNodeType>
1789 template<typename ExtendedCombineOp>
1790 inline void
1791 Tree<RootNodeType>::combineExtended(Tree& other, const ExtendedCombineOp& op, bool prune)
1792 {
1793 33 this->clearAllAccessors();
1794 33 mRoot.template combine<const ExtendedCombineOp>(other.mRoot, op, prune);
1795 }
1796 #endif
1797
1798
1799 template<typename RootNodeType>
1800 template<typename CombineOp, typename OtherTreeType>
1801 inline void
1802 Tree<RootNodeType>::combine2(const Tree& a, const OtherTreeType& b, CombineOp& op, bool prune)
1803 {
1804 CombineOpAdapter<ValueType, CombineOp, typename OtherTreeType::ValueType> extendedOp(op);
1805 this->combine2Extended(a, b, extendedOp, prune);
1806 }
1807
1808
1809 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1810 /// code like this: <tt>tree.combine2(aTree, bTree, MyCombineOp(...))</tt>.
1811 #ifndef _WIN32
1812 template<typename RootNodeType>
1813 template<typename CombineOp, typename OtherTreeType>
1814 inline void
1815 Tree<RootNodeType>::combine2(const Tree& a, const OtherTreeType& b, const CombineOp& op, bool prune)
1816 {
1817 CombineOpAdapter<ValueType, const CombineOp, typename OtherTreeType::ValueType> extendedOp(op);
1818 this->combine2Extended(a, b, extendedOp, prune);
1819 }
1820 #endif
1821
1822
1823 template<typename RootNodeType>
1824 template<typename ExtendedCombineOp, typename OtherTreeType>
1825 inline void
1826 Tree<RootNodeType>::combine2Extended(const Tree& a, const OtherTreeType& b,
1827 ExtendedCombineOp& op, bool prune)
1828 {
1829
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 5 this->clearAllAccessors();
1830 mRoot.combine2(a.root(), b.root(), op, prune);
1831 }
1832
1833
1834 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1835 /// code like the following, where the functor argument is a temporary:
1836 /// <tt>tree.combine2Extended(aTree, bTree, MyCombineOp(...))</tt>.
1837 #ifndef _WIN32
1838 template<typename RootNodeType>
1839 template<typename ExtendedCombineOp, typename OtherTreeType>
1840 inline void
1841 Tree<RootNodeType>::combine2Extended(const Tree& a, const OtherTreeType& b,
1842 const ExtendedCombineOp& op, bool prune)
1843 {
1844 this->clearAllAccessors();
1845 mRoot.template combine2<const ExtendedCombineOp>(a.root(), b.root(), op, prune);
1846 }
1847 #endif
1848
1849
1850 ////////////////////////////////////////
1851
1852
1853 template<typename RootNodeType>
1854 template<typename VisitorOp>
1855 inline void
1856 Tree<RootNodeType>::visit(VisitorOp& op)
1857 {
1858
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 5 this->clearAllAccessors();
1859 mRoot.template visit<VisitorOp>(op);
1860 5 }
1861
1862
1863 template<typename RootNodeType>
1864 template<typename VisitorOp>
1865 inline void
1866 Tree<RootNodeType>::visit(VisitorOp& op) const
1867 {
1868 mRoot.template visit<VisitorOp>(op);
1869 10 }
1870
1871
1872 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1873 /// code like this: <tt>tree.visit(MyVisitorOp(...))</tt>.
1874 template<typename RootNodeType>
1875 template<typename VisitorOp>
1876 inline void
1877 Tree<RootNodeType>::visit(const VisitorOp& op)
1878 {
1879 this->clearAllAccessors();
1880 mRoot.template visit<const VisitorOp>(op);
1881 }
1882
1883
1884 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1885 /// code like this: <tt>tree.visit(MyVisitorOp(...))</tt>.
1886 template<typename RootNodeType>
1887 template<typename VisitorOp>
1888 inline void
1889 Tree<RootNodeType>::visit(const VisitorOp& op) const
1890 {
1891 mRoot.template visit<const VisitorOp>(op);
1892 }
1893
1894
1895 ////////////////////////////////////////
1896
1897
1898 template<typename RootNodeType>
1899 template<typename OtherTreeType, typename VisitorOp>
1900 inline void
1901 Tree<RootNodeType>::visit2(OtherTreeType& other, VisitorOp& op)
1902 {
1903
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 5 this->clearAllAccessors();
1904 using OtherRootNodeType = typename OtherTreeType::RootNodeType;
1905 mRoot.template visit2<OtherRootNodeType, VisitorOp>(other.root(), op);
1906 5 }
1907
1908
1909 template<typename RootNodeType>
1910 template<typename OtherTreeType, typename VisitorOp>
1911 inline void
1912 Tree<RootNodeType>::visit2(OtherTreeType& other, VisitorOp& op) const
1913 {
1914 using OtherRootNodeType = typename OtherTreeType::RootNodeType;
1915 mRoot.template visit2<OtherRootNodeType, VisitorOp>(other.root(), op);
1916 }
1917
1918
1919 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1920 /// code like this: <tt>aTree.visit2(bTree, MyVisitorOp(...))</tt>.
1921 template<typename RootNodeType>
1922 template<typename OtherTreeType, typename VisitorOp>
1923 inline void
1924 Tree<RootNodeType>::visit2(OtherTreeType& other, const VisitorOp& op)
1925 {
1926 this->clearAllAccessors();
1927 using OtherRootNodeType = typename OtherTreeType::RootNodeType;
1928 mRoot.template visit2<OtherRootNodeType, const VisitorOp>(other.root(), op);
1929 }
1930
1931
1932 /// @internal This overload is needed (for ICC and GCC, but not for VC) to disambiguate
1933 /// code like this: <tt>aTree.visit2(bTree, MyVisitorOp(...))</tt>.
1934 template<typename RootNodeType>
1935 template<typename OtherTreeType, typename VisitorOp>
1936 inline void
1937 Tree<RootNodeType>::visit2(OtherTreeType& other, const VisitorOp& op) const
1938 {
1939 using OtherRootNodeType = typename OtherTreeType::RootNodeType;
1940 mRoot.template visit2<OtherRootNodeType, const VisitorOp>(other.root(), op);
1941 }
1942
1943
1944 ////////////////////////////////////////
1945
1946
1947 template<typename RootNodeType>
1948 inline const Name&
1949 Tree<RootNodeType>::treeType()
1950 {
1951 static std::once_flag once;
1952
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 294596 std::call_once(once, []()
1953 {
1954 std::vector<Index> dims;
1955
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 41 Tree::getNodeLog2Dims(dims);
1956
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 82 std::ostringstream ostr;
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 41 ostr << "Tree_" << typeNameAsString<BuildType>();
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 164 for (size_t i = 1, N = dims.size(); i < N; ++i) { // start from 1 to skip the RootNode
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 123 ostr << "_" << dims[i];
1960 }
1961
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 41 sTreeTypeName.reset(new Name(ostr.str()));
1962 });
1963 return *sTreeTypeName;
1964 }
1965
1966
1967 template<typename RootNodeType>
1968 template<typename OtherRootNodeType>
1969 inline bool
1970 Tree<RootNodeType>::hasSameTopology(const Tree<OtherRootNodeType>& other) const
1971 {
1972
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 3384 return mRoot.hasSameTopology(other.root());
1973 }
1974
1975
1976 template<typename RootNodeType>
1977 inline bool
1978 80 Tree<RootNodeType>::evalLeafBoundingBox(CoordBBox& bbox) const
1979 {
1980 80 bbox.reset(); // default invalid bbox
1981
1982
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 80 if (this->empty()) return false; // empty
1983
1984 78 mRoot.evalActiveBoundingBox(bbox, false);
1985
1986 78 return !bbox.empty();
1987 }
1988
1989 template<typename RootNodeType>
1990 inline bool
1991 748 Tree<RootNodeType>::evalActiveVoxelBoundingBox(CoordBBox& bbox) const
1992 {
1993 748 bbox.reset(); // default invalid bbox
1994
1995
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 748 if (this->empty()) return false; // empty
1996
1997 746 mRoot.evalActiveBoundingBox(bbox, true);
1998
1999 746 return !bbox.empty();
2000 }
2001
2002
2003 template<typename RootNodeType>
2004 inline bool
2005 2 Tree<RootNodeType>::evalActiveVoxelDim(Coord& dim) const
2006 {
2007 2 CoordBBox bbox;
2008 2 bool notEmpty = this->evalActiveVoxelBoundingBox(bbox);
2009 2 dim = bbox.extents();
2010 2 return notEmpty;
2011 }
2012
2013
2014 template<typename RootNodeType>
2015 inline bool
2016 ✗ Tree<RootNodeType>::evalLeafDim(Coord& dim) const
2017 {
2018 ✗ CoordBBox bbox;
2019 ✗ bool notEmpty = this->evalLeafBoundingBox(bbox);
2020 ✗ dim = bbox.extents();
2021 ✗ return notEmpty;
2022 }
2023
2024
2025 template<typename RootNodeType>
2026 inline void
2027 Tree<RootNodeType>::evalMinMax(ValueType& minVal, ValueType& maxVal) const
2028 {
2029 minVal = maxVal = zeroVal<ValueType>();
2030 if (ValueOnCIter iter = this->cbeginValueOn()) {
2031 minVal = maxVal = *iter;
2032 for (++iter; iter; ++iter) {
2033 const ValueType& val = *iter;
2034 if (math::cwiseLessThan(val, minVal)) minVal = val;
2035 if (math::cwiseGreaterThan(val, maxVal)) maxVal = val;
2036 }
2037 }
2038 }
2039
2040
2041 template<typename RootNodeType>
2042 inline void
2043
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 94 Tree<RootNodeType>::getNodeLog2Dims(std::vector<Index>& dims)
2044 {
2045 dims.clear();
2046 ✗ RootNodeType::getNodeLog2Dims(dims);
2047 94 }
2048
2049
2050 template<typename RootNodeType>
2051 inline void
2052 ✗ Tree<RootNodeType>::print(std::ostream& os, int verboseLevel) const
2053 {
2054 ✗ if (verboseLevel <= 0) return;
2055
2056 /// @todo Consider using boost::io::ios_precision_saver instead.
2057 struct OnExit {
2058 std::ostream& os;
2059 std::streamsize savedPrecision;
2060 ✗ OnExit(std::ostream& _os): os(_os), savedPrecision(os.precision()) {}
2061 ✗ ~OnExit() { os.precision(savedPrecision); }
2062 };
2063 OnExit restorePrecision(os);
2064
2065 std::vector<Index> dims;
2066 ✗ Tree::getNodeLog2Dims(dims);// leaf is the last element
2067
2068 os << "Information about Tree:\n"
2069 ✗ << " Type: " << this->type() << "\n";
2070
2071 ✗ os << " Configuration:\n";
2072
2073 ✗ if (verboseLevel <= 1) {
2074 // Print node types and sizes.
2075 ✗ os << " Root(" << mRoot.getTableSize() << ")";
2076 ✗ if (dims.size() > 1) {
2077 ✗ for (size_t i = 1, N = dims.size() - 1; i < N; ++i) {
2078 ✗ os << ", Internal(" << (1 << dims[i]) << "^3)";
2079 }
2080 ✗ os << ", Leaf(" << (1 << dims.back()) << "^3)\n";
2081 }
2082 ✗ os << " Background value: " << mRoot.background() << "\n";
2083 return;
2084 }
2085
2086 // The following is tree information that is expensive to extract.
2087
2088 ✗ ValueType minVal = zeroVal<ValueType>(), maxVal = zeroVal<ValueType>();
2089 ✗ if (verboseLevel > 3) {
2090 // This forces loading of all non-resident nodes.
2091 ✗ const math::MinMax<ValueType> extrema = tools::minMax(*this);
2092 ✗ minVal = extrema.min();
2093 ✗ maxVal = extrema.max();
2094 }
2095
2096 ✗ const auto nodeCount = this->nodeCount();//fast
2097 ✗ const Index32 leafCount = nodeCount.front();// leaf is the first element
2098 ✗ assert(dims.size() == nodeCount.size());
2099
2100 Index64 totalNodeCount = 0;
2101 ✗ for (size_t i = 0; i < nodeCount.size(); ++i) totalNodeCount += nodeCount[i];
2102
2103 // Print node types, counts and sizes.
2104 ✗ os << " Root(1 x " << mRoot.getTableSize() << ")";
2105 ✗ if (dims.size() >= 2) {
2106 ✗ for (size_t i = 1, N = dims.size() - 1; i < N; ++i) {
2107 ✗ os << ", Internal(" << util::formattedInt(nodeCount[N - i]);
2108 ✗ os << " x " << (1 << dims[i]) << "^3)";
2109 }
2110 ✗ os << ", Leaf(" << util::formattedInt(leafCount);
2111 ✗ os << " x " << (1 << dims.back()) << "^3)\n";
2112 }
2113 ✗ os << " Background value: " << mRoot.background() << "\n";
2114
2115 // Statistics of topology and values
2116
2117 ✗ if (verboseLevel > 3) {
2118 ✗ os << " Min value: " << minVal << "\n";
2119 ✗ os << " Max value: " << maxVal << "\n";
2120 }
2121
2122 const Index64
2123 ✗ numActiveVoxels = this->activeVoxelCount(),
2124 ✗ numActiveLeafVoxels = this->activeLeafVoxelCount(),
2125 ✗ numActiveTiles = this->activeTileCount();
2126
2127 ✗ os << " Number of active voxels: " << util::formattedInt(numActiveVoxels) << "\n";
2128 ✗ os << " Number of active tiles: " << util::formattedInt(numActiveTiles) << "\n";
2129
2130 Coord dim(0, 0, 0);
2131 Index64 totalVoxels = 0;
2132 ✗ if (numActiveVoxels) { // nonempty
2133 ✗ CoordBBox bbox;
2134 ✗ this->evalActiveVoxelBoundingBox(bbox);
2135 ✗ dim = bbox.extents();
2136 ✗ totalVoxels = dim.x() * uint64_t(dim.y()) * dim.z();
2137
2138 ✗ os << " Bounding box of active voxels: " << bbox << "\n";
2139 os << " Dimensions of active voxels: "
2140 ✗ << dim[0] << " x " << dim[1] << " x " << dim[2] << "\n";
2141
2142 ✗ const double activeRatio = (100.0 * double(numActiveVoxels)) / double(totalVoxels);
2143 ✗ os << " Percentage of active voxels: " << std::setprecision(3) << activeRatio << "%\n";
2144
2145 ✗ if (leafCount > 0) {
2146 ✗ const double fillRatio = (100.0 * double(numActiveLeafVoxels))
2147 ✗ / (double(leafCount) * double(LeafNodeType::NUM_VOXELS));
2148 ✗ os << " Average leaf node fill ratio: " << fillRatio << "%\n";
2149 }
2150
2151 ✗ if (verboseLevel > 2) {
2152 Index64 sum = 0;// count the number of unallocated leaf nodes
2153 ✗ for (auto it = this->cbeginLeaf(); it; ++it) if (!it->isAllocated()) ++sum;
2154 os << " Number of unallocated nodes: "
2155 ✗ << util::formattedInt(sum) << " ("
2156 ✗ << (100.0 * double(sum) / double(totalNodeCount)) << "%)\n";
2157 }
2158 } else {
2159 ✗ os << " Tree is empty!\n";
2160 }
2161 os << std::flush;
2162
2163 ✗ if (verboseLevel == 2) return;
2164
2165 // Memory footprint in bytes
2166 const Index64
2167 ✗ actualMem = this->memUsage(),
2168 ✗ denseMem = sizeof(ValueType) * totalVoxels,
2169 ✗ voxelsMem = sizeof(ValueType) * numActiveLeafVoxels;
2170 ///< @todo not accurate for BoolTree (and probably should count tile values)
2171
2172 ✗ os << "Memory footprint:\n";
2173 ✗ util::printBytes(os, actualMem, " Actual: ");
2174 ✗ util::printBytes(os, voxelsMem, " Active leaf voxels: ");
2175
2176 ✗ if (numActiveVoxels) {
2177 ✗ util::printBytes(os, denseMem, " Dense equivalent: ");
2178 ✗ os << " Actual footprint is " << (100.0 * double(actualMem) / double(denseMem))
2179 ✗ << "% of an equivalent dense volume\n";
2180 ✗ os << " Leaf voxel footprint is " << (100.0 * double(voxelsMem) / double(actualMem))
2181 ✗ << "% of actual footprint\n";
2182 }
2183 }
2184
2185 } // namespace tree
2186 } // namespace OPENVDB_VERSION_NAME
2187 } // namespace openvdb
2188
2189 #endif // OPENVDB_TREE_TREE_HAS_BEEN_INCLUDED
2190