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1 | // Copyright Contributors to the OpenVDB Project | ||
2 | // SPDX-License-Identifier: MPL-2.0 | ||
3 | // | ||
4 | /// @file FastSweeping.h | ||
5 | /// | ||
6 | /// @author Ken Museth | ||
7 | /// | ||
8 | /// @brief Defined the six functions {fog,sdf}To{Sdf,Ext,SdfAndExt} in | ||
9 | /// addition to the two functions maskSdf and dilateSdf. Sdf denotes | ||
10 | /// a signed-distance field (i.e. negative values are inside), fog | ||
11 | /// is a scalar fog volume (i.e. higher values are inside), and Ext is | ||
12 | /// a field (of arbitrary type) that is extended off the iso-surface. | ||
13 | /// All these functions are implemented with the methods in the class | ||
14 | /// named FastSweeping. | ||
15 | /// | ||
16 | /// @note Solves the (simplified) Eikonal Eq: @f$|\nabla \phi|^2 = 1@f$ and | ||
17 | /// performs velocity extension, @f$\nabla f\nabla \phi = 0@f$, both | ||
18 | /// by means of the fast sweeping algorithm detailed in: | ||
19 | /// "A Fast Sweeping Method For Eikonal Equations" | ||
20 | /// by H. Zhao, Mathematics of Computation, Vol 74(230), pp 603-627, 2004 | ||
21 | /// | ||
22 | /// @details The algorithm used below for parallel fast sweeping was first published in: | ||
23 | /// "New Algorithm for Sparse and Parallel Fast Sweeping: Efficient | ||
24 | /// Computation of Sparse Distance Fields" by K. Museth, ACM SIGGRAPH Talk, | ||
25 | /// 2017, http://www.museth.org/Ken/Publications_files/Museth_SIG17.pdf | ||
26 | |||
27 | #ifndef OPENVDB_TOOLS_FASTSWEEPING_HAS_BEEN_INCLUDED | ||
28 | #define OPENVDB_TOOLS_FASTSWEEPING_HAS_BEEN_INCLUDED | ||
29 | |||
30 | //#define BENCHMARK_FAST_SWEEPING | ||
31 | |||
32 | #include <openvdb/Platform.h> | ||
33 | #include <openvdb/math/Math.h> // for Abs() and isExactlyEqual() | ||
34 | #include <openvdb/math/Stencils.h> // for GradStencil | ||
35 | #include <openvdb/tree/LeafManager.h> | ||
36 | #include "LevelSetUtil.h" | ||
37 | #include "Morphology.h" | ||
38 | #include <openvdb/openvdb.h> | ||
39 | |||
40 | #include "Statistics.h" | ||
41 | #ifdef BENCHMARK_FAST_SWEEPING | ||
42 | #include <openvdb/util/CpuTimer.h> | ||
43 | #endif | ||
44 | |||
45 | #include <tbb/parallel_for.h> | ||
46 | #include <tbb/enumerable_thread_specific.h> | ||
47 | #include <tbb/task_group.h> | ||
48 | |||
49 | #include <type_traits>// for static_assert | ||
50 | #include <cmath> | ||
51 | #include <limits> | ||
52 | #include <deque> | ||
53 | #include <unordered_map> | ||
54 | #include <utility>// for std::make_pair | ||
55 | |||
56 | namespace openvdb { | ||
57 | OPENVDB_USE_VERSION_NAMESPACE | ||
58 | namespace OPENVDB_VERSION_NAME { | ||
59 | namespace tools { | ||
60 | |||
61 | /// @brief Fast Sweeping update mode. This is useful to determine | ||
62 | /// narrow-band extension or field extension in one side | ||
63 | /// of a signed distance field. | ||
64 | enum class FastSweepingDomain { | ||
65 | /// Update all voxels affected by the sweeping algorithm | ||
66 | SWEEP_ALL, | ||
67 | // Update voxels corresponding to an sdf/fog values that are greater than a given isovalue | ||
68 | SWEEP_GREATER_THAN_ISOVALUE, | ||
69 | // Update voxels corresponding to an sdf/fog values that are less than a given isovalue | ||
70 | SWEEP_LESS_THAN_ISOVALUE | ||
71 | }; | ||
72 | |||
73 | /// @brief Converts a scalar fog volume into a signed distance function. Active input voxels | ||
74 | /// with scalar values above the given isoValue will have NEGATIVE distance | ||
75 | /// values on output, i.e. they are assumed to be INSIDE the iso-surface. | ||
76 | /// | ||
77 | /// @return A shared pointer to a signed-distance field defined on the active values | ||
78 | /// of the input fog volume. | ||
79 | /// | ||
80 | /// @param fogGrid Scalar (floating-point) volume from which an | ||
81 | /// iso-surface can be defined. | ||
82 | /// | ||
83 | /// @param isoValue A value which defines a smooth iso-surface that | ||
84 | /// intersects active voxels in @a fogGrid. | ||
85 | /// | ||
86 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
87 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
88 | /// | ||
89 | /// @note Strictly speaking a fog volume is normalized to the range [0,1] but this | ||
90 | /// method accepts a scalar volume with an arbritary range, as long as the it | ||
91 | /// includes the @a isoValue. | ||
92 | /// | ||
93 | /// @details Topology of output grid is identical to that of the input grid, except | ||
94 | /// active tiles in the input grid will be converted to active voxels | ||
95 | /// in the output grid! | ||
96 | /// | ||
97 | /// @warning If @a isoValue does not intersect any active values in | ||
98 | /// @a fogGrid then the returned grid has all its active values set to | ||
99 | /// plus or minus infinity, depending on if the input values are larger or | ||
100 | /// smaller than @a isoValue. | ||
101 | template<typename GridT> | ||
102 | typename GridT::Ptr | ||
103 | fogToSdf(const GridT &fogGrid, | ||
104 | typename GridT::ValueType isoValue, | ||
105 | int nIter = 1); | ||
106 | |||
107 | /// @brief Given an existing approximate SDF it solves the Eikonal equation for all its | ||
108 | /// active voxels. Active input voxels with a signed distance value above the | ||
109 | /// given isoValue will have POSITIVE distance values on output, i.e. they are | ||
110 | /// assumed to be OUTSIDE the iso-surface. | ||
111 | /// | ||
112 | /// @return A shared pointer to a signed-distance field defined on the active values | ||
113 | /// of the input sdf volume. | ||
114 | /// | ||
115 | /// @param sdfGrid An approximate signed distance field to the specified iso-surface. | ||
116 | /// | ||
117 | /// @param isoValue A value which defines a smooth iso-surface that | ||
118 | /// intersects active voxels in @a sdfGrid. | ||
119 | /// | ||
120 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
121 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
122 | /// | ||
123 | /// @note The only difference between this method and fogToSdf, defined above, is the | ||
124 | /// convention of the sign of the output distance field. | ||
125 | /// | ||
126 | /// @details Topology of output grid is identical to that of the input grid, except | ||
127 | /// active tiles in the input grid will be converted to active voxels | ||
128 | /// in the output grid! | ||
129 | /// | ||
130 | /// @warning If @a isoValue does not intersect any active values in | ||
131 | /// @a sdfGrid then the returned grid has all its active values set to | ||
132 | /// plus or minus infinity, depending on if the input values are larger or | ||
133 | /// smaller than @a isoValue. | ||
134 | template<typename GridT> | ||
135 | typename GridT::Ptr | ||
136 | sdfToSdf(const GridT &sdfGrid, | ||
137 | typename GridT::ValueType isoValue = 0, | ||
138 | int nIter = 1); | ||
139 | |||
140 | /// @brief Computes the extension of a field (scalar, vector, or int are supported), defined | ||
141 | /// by the specified functor, off an iso-surface from an input FOG volume. | ||
142 | /// | ||
143 | /// @return A shared pointer to the extension field defined from the active values in | ||
144 | /// the input fog volume. | ||
145 | /// | ||
146 | /// @param fogGrid Scalar (floating-point) volume from which an | ||
147 | /// iso-surface can be defined. | ||
148 | /// | ||
149 | /// @param op Functor with signature [](const Vec3R &xyz)->ExtValueT that | ||
150 | /// defines the Dirichlet boundary condition, on the iso-surface, | ||
151 | /// of the field to be extended. | ||
152 | /// | ||
153 | /// @param background Background value of return grid with the extension field. | ||
154 | /// | ||
155 | /// @param isoValue A value which defines a smooth iso-surface that | ||
156 | /// intersects active voxels in @a fogGrid. | ||
157 | /// | ||
158 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
159 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
160 | /// | ||
161 | /// @param mode Determines the mode of updating the extension field. SWEEP_ALL | ||
162 | /// will update all voxels of the extension field affected by the | ||
163 | /// fast sweeping algorithm. SWEEP_GREATER_THAN_ISOVALUE will update | ||
164 | /// all voxels corresponding to fog values that are greater than a given | ||
165 | /// isovalue. SWEEP_LESS_THAN_ISOVALUE will update all voxels corresponding | ||
166 | /// to fog values that are less than a given isovalue. If a mode other | ||
167 | /// than SWEEP_ALL is chosen, a user needs to supply @a extGrid. | ||
168 | /// | ||
169 | /// @param extGrid Optional parameter required to supply a default value for the extension | ||
170 | /// field when SWEEP_GREATER_THAN_ISOVALUE or SWEEP_LESS_THAN_ISOVALUE | ||
171 | /// mode is picked for @a mode. When SWEEP_GREATER_THAN_ISOVALUE is supplied | ||
172 | /// as an argument for @a mode, the extension field voxel will default | ||
173 | /// to the value of the @a extGrid in that position if it corresponds to a fog | ||
174 | /// value that is less than the isovalue. Otherwise, the extension | ||
175 | /// field voxel value will be computed by the Fast Sweeping algorithm. | ||
176 | /// The opposite convention is implemented when SWEEP_LESS_THAN_ISOVALUE | ||
177 | /// is supplied as an argument for @a mode. | ||
178 | /// | ||
179 | /// @note Strictly speaking a fog volume is normalized to the range [0,1] but this | ||
180 | /// method accepts a scalar volume with an arbritary range, as long as the it | ||
181 | /// includes the @a isoValue. | ||
182 | /// | ||
183 | /// @details Topology of output grid is identical to that of the input grid, except | ||
184 | /// active tiles in the input grid will be converted to active voxels | ||
185 | /// in the output grid! | ||
186 | /// | ||
187 | /// @warning If @a isoValue does not intersect any active values in | ||
188 | /// @a fogGrid then the returned grid has all its active values set to | ||
189 | /// @a background. | ||
190 | template<typename FogGridT, typename ExtOpT, typename ExtValueT> | ||
191 | typename FogGridT::template ValueConverter<ExtValueT>::Type::Ptr | ||
192 | fogToExt(const FogGridT &fogGrid, | ||
193 | const ExtOpT &op, | ||
194 | const ExtValueT& background, | ||
195 | typename FogGridT::ValueType isoValue, | ||
196 | int nIter = 1, | ||
197 | FastSweepingDomain mode = FastSweepingDomain::SWEEP_ALL, | ||
198 | const typename FogGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid = nullptr); | ||
199 | |||
200 | /// @brief Computes the extension of a field (scalar, vector, or int are supported), defined | ||
201 | /// by the specified functor, off an iso-surface from an input SDF volume. | ||
202 | /// | ||
203 | /// @return A shared pointer to the extension field defined on the active values in the | ||
204 | /// input signed distance field. | ||
205 | /// | ||
206 | /// @param sdfGrid An approximate signed distance field to the specified iso-surface. | ||
207 | /// | ||
208 | /// @param op Functor with signature [](const Vec3R &xyz)->ExtValueT that | ||
209 | /// defines the Dirichlet boundary condition, on the iso-surface, | ||
210 | /// of the field to be extended. | ||
211 | /// | ||
212 | /// @param background Background value of return grid with the extension field. | ||
213 | /// | ||
214 | /// @param isoValue A value which defines a smooth iso-surface that | ||
215 | /// intersects active voxels in @a sdfGrid. | ||
216 | /// | ||
217 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
218 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
219 | /// | ||
220 | /// @param mode Determines the mode of updating the extension field. SWEEP_ALL | ||
221 | /// will update all voxels of the extension field affected by the | ||
222 | /// fast sweeping algorithm. SWEEP_GREATER_THAN_ISOVALUE will update | ||
223 | /// all voxels corresponding to level set values that are greater than a given | ||
224 | /// isovalue. SWEEP_LESS_THAN_ISOVALUE will update all voxels corresponding | ||
225 | /// to level set values that are less than a given isovalue. If a mode other | ||
226 | /// than SWEEP_ALL is chosen, a user needs to supply @a extGrid. | ||
227 | /// | ||
228 | /// @param extGrid Optional parameter required to supply a default value for the extension | ||
229 | /// field when SWEEP_GREATER_THAN_ISOVALUE or SWEEP_LESS_THAN_ISOVALUE | ||
230 | /// mode is picked for @a mode. When SWEEP_GREATER_THAN_ISOVALUE is supplied | ||
231 | /// as an argument for @a mode, the extension field voxel will default | ||
232 | /// to the value of the @a extGrid in that position if it corresponds to a level-set | ||
233 | /// value that is less than the isovalue. Otherwise, the extension | ||
234 | /// field voxel value will be computed by the Fast Sweeping algorithm. | ||
235 | /// The opposite convention is implemented when SWEEP_LESS_THAN_ISOVALUE | ||
236 | /// is supplied as an argument for @a mode. | ||
237 | /// | ||
238 | /// @note The only difference between this method and fogToExt, defined above, is the | ||
239 | /// convention of the sign of the signed distance field. | ||
240 | /// | ||
241 | /// @details Topology of output grid is identical to that of the input grid, except | ||
242 | /// active tiles in the input grid will be converted to active voxels | ||
243 | /// in the output grid! | ||
244 | /// | ||
245 | /// @warning If @a isoValue does not intersect any active values in | ||
246 | /// @a sdfGrid then the returned grid has all its active values set to | ||
247 | /// @a background. | ||
248 | template<typename SdfGridT, typename ExtOpT, typename ExtValueT> | ||
249 | typename SdfGridT::template ValueConverter<ExtValueT>::Type::Ptr | ||
250 | sdfToExt(const SdfGridT &sdfGrid, | ||
251 | const ExtOpT &op, | ||
252 | const ExtValueT &background, | ||
253 | typename SdfGridT::ValueType isoValue = 0, | ||
254 | int nIter = 1, | ||
255 | FastSweepingDomain mode = FastSweepingDomain::SWEEP_ALL, | ||
256 | const typename SdfGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid = nullptr); | ||
257 | |||
258 | /// @brief Computes the signed distance field and the extension of a field (scalar, vector, or | ||
259 | /// int are supported), defined by the specified functor, off an iso-surface from an input | ||
260 | /// FOG volume. | ||
261 | /// | ||
262 | /// @return An pair of two shared pointers to respectively the SDF and extension field | ||
263 | /// | ||
264 | /// @param fogGrid Scalar (floating-point) volume from which an | ||
265 | /// iso-surface can be defined. | ||
266 | /// | ||
267 | /// @param op Functor with signature [](const Vec3R &xyz)->ExtValueT that | ||
268 | /// defines the Dirichlet boundary condition, on the iso-surface, | ||
269 | /// of the field to be extended. | ||
270 | /// | ||
271 | /// @param background Background value of return grid with the extension field. | ||
272 | /// | ||
273 | /// @param isoValue A value which defines a smooth iso-surface that | ||
274 | /// intersects active voxels in @a fogGrid. | ||
275 | /// | ||
276 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
277 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
278 | /// | ||
279 | /// @param mode Determines the mode of updating the extension field. SWEEP_ALL | ||
280 | /// will update all voxels of the extension field affected by the | ||
281 | /// fast sweeping algorithm. SWEEP_GREATER_THAN_ISOVALUE will update | ||
282 | /// all voxels corresponding to fog values that are greater than a given | ||
283 | /// isovalue. SWEEP_LESS_THAN_ISOVALUE will update all voxels corresponding | ||
284 | /// to fog values that are less than a given isovalue. If a mode other | ||
285 | /// than SWEEP_ALL is chosen, a user needs to supply @a extGrid. | ||
286 | /// | ||
287 | /// @param extGrid Optional parameter required to supply a default value for the extension | ||
288 | /// field when SWEEP_GREATER_THAN_ISOVALUE or SWEEP_LESS_THAN_ISOVALUE | ||
289 | /// mode is picked for @a mode. When SWEEP_GREATER_THAN_ISOVALUE is supplied | ||
290 | /// as an argument for @a mode, the extension field voxel will default | ||
291 | /// to the value of the @a extGrid in that position if it corresponds to a fog | ||
292 | /// value that is less than the isovalue. Otherwise, the extension | ||
293 | /// field voxel value will be computed by the Fast Sweeping algorithm. | ||
294 | /// The opposite convention is implemented when SWEEP_LESS_THAN_ISOVALUE | ||
295 | /// is supplied as an argument for @a mode. | ||
296 | /// | ||
297 | /// @note Strictly speaking a fog volume is normalized to the range [0,1] but this | ||
298 | /// method accepts a scalar volume with an arbritary range, as long as the it | ||
299 | /// includes the @a isoValue. | ||
300 | /// | ||
301 | /// @details Topology of output grids are identical to that of the input grid, except | ||
302 | /// active tiles in the input grid will be converted to active voxels | ||
303 | /// in the output grids! | ||
304 | /// | ||
305 | /// @warning If @a isoValue does not intersect any active values in | ||
306 | /// @a fogGrid then a pair of the following grids is returned: The first | ||
307 | /// is a signed distance grid with its active values set to plus or minus | ||
308 | /// infinity depending of whether its input values are above or below @a isoValue. | ||
309 | /// The second grid, which represents the extension field, has all its active | ||
310 | /// values set to @a background. | ||
311 | template<typename FogGridT, typename ExtOpT, typename ExtValueT> | ||
312 | std::pair<typename FogGridT::Ptr, typename FogGridT::template ValueConverter<ExtValueT>::Type::Ptr> | ||
313 | fogToSdfAndExt(const FogGridT &fogGrid, | ||
314 | const ExtOpT &op, | ||
315 | const ExtValueT &background, | ||
316 | typename FogGridT::ValueType isoValue, | ||
317 | int nIter = 1, | ||
318 | FastSweepingDomain mode = FastSweepingDomain::SWEEP_ALL, | ||
319 | const typename FogGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid = nullptr); | ||
320 | |||
321 | /// @brief Computes the signed distance field and the extension of a field (scalar, vector, or | ||
322 | /// int are supported), defined by the specified functor, off an iso-surface from an input | ||
323 | /// SDF volume. | ||
324 | /// | ||
325 | /// @return A pair of two shared pointers to respectively the SDF and extension field | ||
326 | /// | ||
327 | /// @param sdfGrid Scalar (floating-point) volume from which an | ||
328 | /// iso-surface can be defined. | ||
329 | /// | ||
330 | /// @param op Functor with signature [](const Vec3R &xyz)->ExtValueT that | ||
331 | /// defines the Dirichlet boundary condition, on the iso-surface, | ||
332 | /// of the field to be extended. | ||
333 | /// | ||
334 | /// @param background Background value of return grid with the extension field. | ||
335 | /// | ||
336 | /// @param isoValue A value which defines a smooth iso-surface that | ||
337 | /// intersects active voxels in @a sdfGrid. | ||
338 | /// | ||
339 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
340 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
341 | /// | ||
342 | /// @param mode Determines the mode of updating the extension field. SWEEP_ALL | ||
343 | /// will update all voxels of the extension field affected by the | ||
344 | /// fast sweeping algorithm. SWEEP_GREATER_THAN_ISOVALUE will update | ||
345 | /// all voxels corresponding to level set values that are greater than a given | ||
346 | /// isovalue. SWEEP_LESS_THAN_ISOVALUE will update all voxels corresponding | ||
347 | /// to level set values that are less than a given isovalue. If a mode other | ||
348 | /// than SWEEP_ALL is chosen, a user needs to supply @a extGrid. | ||
349 | /// | ||
350 | /// @param extGrid Optional parameter required to supply a default value for the extension | ||
351 | /// field when SWEEP_GREATER_THAN_ISOVALUE or SWEEP_LESS_THAN_ISOVALUE | ||
352 | /// mode is picked for @a mode. When SWEEP_GREATER_THAN_ISOVALUE is supplied | ||
353 | /// as an argument for @a mode, the extension field voxel will default | ||
354 | /// to the value of the @a extGrid in that position if it corresponds to a level-set | ||
355 | /// value that is less than the isovalue. Otherwise, the extension | ||
356 | /// field voxel value will be computed by the Fast Sweeping algorithm. | ||
357 | /// The opposite convention is implemented when SWEEP_LESS_THAN_ISOVALUE | ||
358 | /// is supplied as an argument for @a mode. | ||
359 | /// | ||
360 | /// @note Strictly speaking a fog volume is normalized to the range [0,1] but this | ||
361 | /// method accepts a scalar volume with an arbritary range, as long as the it | ||
362 | /// includes the @a isoValue. | ||
363 | /// | ||
364 | /// @details Topology of output grids are identical to that of the input grid, except | ||
365 | /// active tiles in the input grid will be converted to active voxels | ||
366 | /// in the output grids! | ||
367 | /// | ||
368 | /// @warning If @a isoValue does not intersect any active values in | ||
369 | /// @a sdfGrid then a pair of the following grids is returned: The first | ||
370 | /// is a signed distance grid with its active values set to plus or minus | ||
371 | /// infinity depending of whether its input values are above or below @a isoValue. | ||
372 | /// The second grid, which represents the extension field, has all its active | ||
373 | /// values set to @a background. | ||
374 | template<typename SdfGridT, typename ExtOpT, typename ExtValueT> | ||
375 | std::pair<typename SdfGridT::Ptr, typename SdfGridT::template ValueConverter<ExtValueT>::Type::Ptr> | ||
376 | sdfToSdfAndExt(const SdfGridT &sdfGrid, | ||
377 | const ExtOpT &op, | ||
378 | const ExtValueT &background, | ||
379 | typename SdfGridT::ValueType isoValue = 0, | ||
380 | int nIter = 1, | ||
381 | FastSweepingDomain mode = FastSweepingDomain::SWEEP_ALL, | ||
382 | const typename SdfGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid = nullptr); | ||
383 | |||
384 | /// @brief Dilates the narrow band of an existing signed distance field by | ||
385 | /// a specified number of voxels (like adding "onion-rings"). | ||
386 | /// | ||
387 | /// @note This operation is not to be confused with morphological dilation | ||
388 | /// of a level set, which is implemented in LevelSetFilter::offset, | ||
389 | /// and involves actual interface tracking of the narrow band. | ||
390 | /// | ||
391 | /// @return A shared pointer to the dilated signed distance field. | ||
392 | /// | ||
393 | /// @param sdfGrid Input signed distance field to be dilated. | ||
394 | /// | ||
395 | /// @param dilation Numer of voxels that the narrow band of the input SDF will be dilated. | ||
396 | /// | ||
397 | /// @param nn Stencil-pattern used for dilation | ||
398 | /// | ||
399 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
400 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
401 | /// | ||
402 | /// @param mode Determines the direction of the dilation. SWEEP_ALL | ||
403 | /// will dilate in both sides of the signed distance function, | ||
404 | /// SWEEP_GREATER_THAN_ISOVALUE will dilate in the positive | ||
405 | /// side of the iso-surface, SWEEP_LESS_THAN_ISOVALUE will dilate | ||
406 | /// in the negative side of the iso-surface. | ||
407 | /// | ||
408 | /// @details Topology will change as a result of this dilation. E.g. if | ||
409 | /// sdfGrid has a width of 3 and @a dilation = 6 then the grid | ||
410 | /// returned by this method is a narrow band signed distance field | ||
411 | /// with a total width of 9 units. | ||
412 | template<typename GridT> | ||
413 | typename GridT::Ptr | ||
414 | dilateSdf(const GridT &sdfGrid, | ||
415 | int dilation, | ||
416 | NearestNeighbors nn = NN_FACE, | ||
417 | int nIter = 1, | ||
418 | FastSweepingDomain mode = FastSweepingDomain::SWEEP_ALL); | ||
419 | |||
420 | /// @brief Fills mask by extending an existing signed distance field into | ||
421 | /// the active values of this input ree of arbitrary value type. | ||
422 | /// | ||
423 | /// @return A shared pointer to the masked signed distance field. | ||
424 | /// | ||
425 | /// @param sdfGrid Input signed distance field to be extended into the mask. | ||
426 | /// | ||
427 | /// @param mask Mask used to identify the topology of the output SDF. | ||
428 | /// Note this mask is assume to overlap with the sdfGrid. | ||
429 | /// | ||
430 | /// @param ignoreActiveTiles If false, active tiles in the mask are treated | ||
431 | /// as active voxels. Else they are ignored. | ||
432 | /// | ||
433 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
434 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
435 | /// | ||
436 | /// @details Topology of the output SDF is determined by the union of the active | ||
437 | /// voxels (or optionally values) in @a sdfGrid and @a mask. | ||
438 | template<typename GridT, typename MaskTreeT> | ||
439 | typename GridT::Ptr | ||
440 | maskSdf(const GridT &sdfGrid, | ||
441 | const Grid<MaskTreeT> &mask, | ||
442 | bool ignoreActiveTiles = false, | ||
443 | int nIter = 1); | ||
444 | |||
445 | //////////////////////////////////////////////////////////////////////////////// | ||
446 | /// @brief Computes signed distance values from an initial iso-surface and | ||
447 | /// optionally performs velocity extension at the same time. This is | ||
448 | /// done by means of a novel sparse and parallel fast sweeping | ||
449 | /// algorithm based on a first order Godunov's scheme. | ||
450 | /// | ||
451 | /// Solves: @f$|\nabla \phi|^2 = 1 @f$ | ||
452 | /// | ||
453 | /// @warning Note, it is important to call one of the initialization methods before | ||
454 | /// called the sweep function. Failure to do so will throw a RuntimeError. | ||
455 | /// Consider instead call one of the many higher-level free-standing functions | ||
456 | /// defined above! | ||
457 | template<typename SdfGridT, typename ExtValueT = typename SdfGridT::ValueType> | ||
458 | class FastSweeping | ||
459 | { | ||
460 | static_assert(std::is_floating_point<typename SdfGridT::ValueType>::value, | ||
461 | "FastSweeping requires SdfGridT to have floating-point values"); | ||
462 | // Defined types related to the signed distance (or fog) grid | ||
463 | using SdfValueT = typename SdfGridT::ValueType; | ||
464 | using SdfTreeT = typename SdfGridT::TreeType; | ||
465 | using SdfAccT = tree::ValueAccessor<SdfTreeT, false>;//don't register accessors | ||
466 | using SdfConstAccT = typename tree::ValueAccessor<const SdfTreeT, false>;//don't register accessors | ||
467 | |||
468 | // define types related to the extension field | ||
469 | using ExtGridT = typename SdfGridT::template ValueConverter<ExtValueT>::Type; | ||
470 | using ExtTreeT = typename ExtGridT::TreeType; | ||
471 | using ExtAccT = tree::ValueAccessor<ExtTreeT, false>; | ||
472 | |||
473 | // define types related to the tree that masks out the active voxels to be solved for | ||
474 | using SweepMaskTreeT = typename SdfTreeT::template ValueConverter<ValueMask>::Type; | ||
475 | using SweepMaskAccT = tree::ValueAccessor<SweepMaskTreeT, false>;//don't register accessors | ||
476 | |||
477 | public: | ||
478 | |||
479 | /// @brief Constructor | ||
480 | FastSweeping(); | ||
481 | |||
482 | /// @brief Destructor. | ||
483 | 32 | ~FastSweeping() { this->clear(); } | |
484 | |||
485 | /// @brief Disallow copy construction. | ||
486 | FastSweeping(const FastSweeping&) = delete; | ||
487 | |||
488 | /// @brief Disallow copy assignment. | ||
489 | FastSweeping& operator=(const FastSweeping&) = delete; | ||
490 | |||
491 | /// @brief Returns a shared pointer to the signed distance field computed | ||
492 | /// by this class. | ||
493 | /// | ||
494 | /// @warning This shared pointer might point to NULL if the grid has not been | ||
495 | /// initialize (by one of the init methods) or computed (by the sweep | ||
496 | /// method). | ||
497 | typename SdfGridT::Ptr sdfGrid() { return mSdfGrid; } | ||
498 | |||
499 | /// @brief Returns a shared pointer to the extension field computed | ||
500 | /// by this class. | ||
501 | /// | ||
502 | /// @warning This shared pointer might point to NULL if the grid has not been | ||
503 | /// initialize (by one of the init methods) or computed (by the sweep | ||
504 | /// method). | ||
505 | typename ExtGridT::Ptr extGrid() { return mExtGrid; } | ||
506 | |||
507 | /// @brief Returns a shared pointer to the extension grid input. This is non-NULL | ||
508 | /// if this class is used to extend a field with a non-default sweep direction. | ||
509 | /// | ||
510 | /// @warning This shared pointer might point to NULL. This is non-NULL | ||
511 | /// if this class is used to extend a field with a non-default sweep direction, | ||
512 | /// i.e. SWEEP_LESS_THAN_ISOVALUE or SWEEP_GREATER_THAN_ISOVALUE. | ||
513 | typename ExtGridT::Ptr extGridInput() { return mExtGridInput; } | ||
514 | |||
515 | /// @brief Initializer for input grids that are either a signed distance | ||
516 | /// field or a scalar fog volume. | ||
517 | /// | ||
518 | /// @return True if the initialization succeeded. | ||
519 | /// | ||
520 | /// @param sdfGrid Input scalar grid that represents an existing signed distance | ||
521 | /// field or a fog volume (signified by @a isInputSdf). | ||
522 | /// | ||
523 | /// @param isoValue Iso-value to be used to define the Dirichlet boundary condition | ||
524 | /// of the fast sweeping algorithm (typically 0 for sdfs and a | ||
525 | /// positive value for fog volumes). | ||
526 | /// | ||
527 | /// @param isInputSdf Used to determine if @a sdfGrid is a sigend distance field (true) | ||
528 | /// or a scalar fog volume (false). | ||
529 | /// | ||
530 | /// @details This, or any of ther other initialization methods, should be called | ||
531 | /// before any call to sweep(). Failure to do so will throw a RuntimeError. | ||
532 | /// | ||
533 | /// @warning Note, if this method fails, i.e. returns false, a subsequent call | ||
534 | /// to sweep will trow a RuntimeError. Instead call clear and try again. | ||
535 | bool initSdf(const SdfGridT &sdfGrid, SdfValueT isoValue, bool isInputSdf); | ||
536 | |||
537 | /// @brief Initializer used whenever velocity extension is performed in addition | ||
538 | /// to the computation of signed distance fields. | ||
539 | /// | ||
540 | /// @return True if the initialization succeeded. | ||
541 | /// | ||
542 | /// | ||
543 | /// @param sdfGrid Input scalar grid that represents an existing signed distance | ||
544 | /// field or a fog volume (signified by @a isInputSdf). | ||
545 | /// | ||
546 | /// @param op Functor with signature [](const Vec3R &xyz)->ExtValueT that | ||
547 | /// defines the Dirichlet boundary condition, on the iso-surface, | ||
548 | /// of the field to be extended. Strictly the return type of this functor | ||
549 | /// is only required to be convertible to ExtValueT! | ||
550 | /// | ||
551 | /// @param background Background value of return grid with the extension field. | ||
552 | /// | ||
553 | /// @param isoValue Iso-value to be used for the boundary condition of the fast | ||
554 | /// sweeping algorithm (typically 0 for sdfs and a positive value | ||
555 | /// for fog volumes). | ||
556 | /// | ||
557 | /// @param isInputSdf Used to determine if @a sdfGrid is a sigend distance field (true) | ||
558 | /// or a scalar fog volume (false). | ||
559 | /// | ||
560 | /// @param mode Determines the mode of updating the extension field. SWEEP_ALL | ||
561 | /// will update all voxels of the extension field affected by the | ||
562 | /// fast sweeping algorithm. SWEEP_GREATER_THAN_ISOVALUE will update | ||
563 | /// all voxels corresponding to fog values that are greater than a given | ||
564 | /// isovalue. SWEEP_LESS_THAN_ISOVALUE will update all voxels corresponding | ||
565 | /// to fog values that are less than a given isovalue. If a mode other | ||
566 | /// than SWEEP_ALL is chosen, a user needs to supply @a extGrid. | ||
567 | /// | ||
568 | /// @param extGrid Optional parameter required to supply a default value for the extension | ||
569 | /// field when SWEEP_GREATER_THAN_ISOVALUE or SWEEP_LESS_THAN_ISOVALUE | ||
570 | /// mode is picked for @a mode. When SWEEP_GREATER_THAN_ISOVALUE is supplied | ||
571 | /// as an argument for @a mode, the extension field voxel will default | ||
572 | /// to the value of the @a extGrid in that position if it corresponds to a level-set | ||
573 | /// value that is less than the isovalue. Otherwise, the extension | ||
574 | /// field voxel value will be computed by the Fast Sweeping algorithm. | ||
575 | /// The opposite convention is implemented when SWEEP_LESS_THAN_ISOVALUE | ||
576 | /// is supplied as an argument for @a mode. | ||
577 | /// | ||
578 | /// @details This, or any of ther other initialization methods, should be called | ||
579 | /// before any call to sweep(). Failure to do so will throw a RuntimeError. | ||
580 | /// | ||
581 | /// @warning Note, if this method fails, i.e. returns false, a subsequent call | ||
582 | /// to sweep will trow a RuntimeError. Instead call clear and try again. | ||
583 | template <typename ExtOpT> | ||
584 | bool initExt(const SdfGridT &sdfGrid, | ||
585 | const ExtOpT &op, | ||
586 | const ExtValueT &background, | ||
587 | SdfValueT isoValue, | ||
588 | bool isInputSdf, | ||
589 | FastSweepingDomain mode = FastSweepingDomain::SWEEP_ALL, | ||
590 | const typename ExtGridT::ConstPtr extGrid = nullptr); | ||
591 | |||
592 | /// @brief Initializer used when dilating an existing signed distance field. | ||
593 | /// | ||
594 | /// @return True if the initialization succeeded. | ||
595 | /// | ||
596 | /// @param sdfGrid Input signed distance field to to be dilated. | ||
597 | /// | ||
598 | /// @param dilation Numer of voxels that the input SDF will be dilated. | ||
599 | /// | ||
600 | /// @param nn Stencil-pattern used for dilation | ||
601 | /// | ||
602 | /// @param mode Determines the direction of the dilation. SWEEP_ALL | ||
603 | /// will dilate in both sides of the signed distance function, | ||
604 | /// SWEEP_GREATER_THAN_ISOVALUE will dilate in the positive | ||
605 | /// side of the iso-surface, SWEEP_LESS_THAN_ISOVALUE will dilate | ||
606 | /// in the negative side of the iso-surface. | ||
607 | /// | ||
608 | /// @details This, or any of ther other initialization methods, should be called | ||
609 | /// before any call to sweep(). Failure to do so will throw a RuntimeError. | ||
610 | /// | ||
611 | /// @warning Note, if this method fails, i.e. returns false, a subsequent call | ||
612 | /// to sweep will trow a RuntimeError. Instead call clear and try again. | ||
613 | bool initDilate(const SdfGridT &sdfGrid, | ||
614 | int dilation, | ||
615 | NearestNeighbors nn = NN_FACE, | ||
616 | FastSweepingDomain mode = FastSweepingDomain::SWEEP_ALL); | ||
617 | |||
618 | /// @brief Initializer used for the extension of an existing signed distance field | ||
619 | /// into the active values of an input mask of arbitrary value type. | ||
620 | /// | ||
621 | /// @return True if the initialization succeeded. | ||
622 | /// | ||
623 | /// @param sdfGrid Input signed distance field to be extended into the mask. | ||
624 | /// | ||
625 | /// @param mask Mask used to identify the topology of the output SDF. | ||
626 | /// Note this mask is assume to overlap with the sdfGrid. | ||
627 | /// | ||
628 | /// @param ignoreActiveTiles If false, active tiles in the mask are treated | ||
629 | /// as active voxels. Else they are ignored. | ||
630 | /// | ||
631 | /// @details This, or any of ther other initialization methods, should be called | ||
632 | /// before any call to sweep(). Failure to do so will throw a RuntimeError. | ||
633 | /// | ||
634 | /// @warning Note, if this method fails, i.e. returns false, a subsequent call | ||
635 | /// to sweep will trow a RuntimeError. Instead call clear and try again. | ||
636 | template<typename MaskTreeT> | ||
637 | bool initMask(const SdfGridT &sdfGrid, const Grid<MaskTreeT> &mask, bool ignoreActiveTiles = false); | ||
638 | |||
639 | /// @brief Perform @a nIter iterations of the fast sweeping algorithm. | ||
640 | /// | ||
641 | /// @param nIter Number of iterations of the fast sweeping algorithm. | ||
642 | /// Each iteration performs 2^3 = 8 individual sweeps. | ||
643 | /// | ||
644 | /// @param finalize If true the (possibly asymmetric) inside and outside values of the | ||
645 | /// resulting signed distance field are properly set. Unless you're | ||
646 | /// an expert this should remain true! | ||
647 | /// | ||
648 | /// @throw RuntimeError if sweepingVoxelCount() or boundaryVoxelCount() return zero. | ||
649 | /// This might happen if none of the initialization methods above were called | ||
650 | /// or if that initialization failed. | ||
651 | void sweep(int nIter = 1, | ||
652 | bool finalize = true); | ||
653 | |||
654 | /// @brief Clears all the grids and counters so initialization can be called again. | ||
655 | void clear(); | ||
656 | |||
657 | /// @brief Return the number of voxels that will be solved for. | ||
658 |
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5 | size_t sweepingVoxelCount() const { return mSweepingVoxelCount; } |
659 | |||
660 | /// @brief Return the number of voxels that defined the boundary condition. | ||
661 |
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4 | size_t boundaryVoxelCount() const { return mBoundaryVoxelCount; } |
662 | |||
663 | /// @brief Return true if there are voxels and boundaries to solve for | ||
664 |
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8 | bool isValid() const { return mSweepingVoxelCount > 0 && mBoundaryVoxelCount > 0; } |
665 | |||
666 | /// @brief Return whether the sweep update is in all direction (SWEEP_ALL), | ||
667 | /// greater than isovalue (SWEEP_GREATER_THAN_ISOVALUE), or less than isovalue | ||
668 | /// (SWEEP_LESS_THAN_ISOVALUE). | ||
669 | /// | ||
670 | /// @note SWEEP_GREATER_THAN_ISOVALUE and SWEEP_LESS_THAN_ISOVALUE modes are used | ||
671 | /// in dilating the narrow-band of a levelset or in extending a field. | ||
672 | FastSweepingDomain sweepDirection() const { return mSweepDirection; } | ||
673 | |||
674 | /// @brief Return whether the fast-sweeping input grid a signed distance function or not (fog). | ||
675 | bool isInputSdf() { return mIsInputSdf; } | ||
676 | |||
677 | private: | ||
678 | |||
679 | /// @brief Private method to prune the sweep mask and cache leaf origins. | ||
680 | void computeSweepMaskLeafOrigins(); | ||
681 | |||
682 | // Private utility classes | ||
683 | template<typename> | ||
684 | struct MaskKernel;// initialization to extend a SDF into a mask | ||
685 | template<typename> | ||
686 | struct InitExt; | ||
687 | struct InitSdf; | ||
688 | struct DilateKernel;// initialization to dilate a SDF | ||
689 | struct MinMaxKernel; | ||
690 | struct SweepingKernel;// performs the actual concurrent sparse fast sweeping | ||
691 | |||
692 | // Define the topology (i.e. stencil) of the neighboring grid points | ||
693 | static const Coord mOffset[6];// = {{-1,0,0},{1,0,0},{0,-1,0},{0,1,0},{0,0,-1},{0,0,1}}; | ||
694 | |||
695 | // Private member data of FastSweeping | ||
696 | typename SdfGridT::Ptr mSdfGrid; | ||
697 | typename ExtGridT::Ptr mExtGrid; | ||
698 | typename ExtGridT::Ptr mExtGridInput; // optional: only used in extending a field in one direction | ||
699 | SweepMaskTreeT mSweepMask; // mask tree containing all non-boundary active voxels, in the case of dilation, does not include active voxel | ||
700 | std::vector<Coord> mSweepMaskLeafOrigins; // cache of leaf node origins for mask tree | ||
701 | size_t mSweepingVoxelCount, mBoundaryVoxelCount; | ||
702 | FastSweepingDomain mSweepDirection; // only used in dilate and extending a field | ||
703 | bool mIsInputSdf; | ||
704 | };// FastSweeping | ||
705 | |||
706 | //////////////////////////////////////////////////////////////////////////////// | ||
707 | |||
708 | // Static member data initialization | ||
709 | template <typename SdfGridT, typename ExtValueT> | ||
710 | const Coord FastSweeping<SdfGridT, ExtValueT>::mOffset[6] = {{-1,0,0},{1,0,0}, | ||
711 | {0,-1,0},{0,1,0}, | ||
712 | {0,0,-1},{0,0,1}}; | ||
713 | |||
714 | template <typename SdfGridT, typename ExtValueT> | ||
715 | 16 | FastSweeping<SdfGridT, ExtValueT>::FastSweeping() | |
716 | 16 | : mSdfGrid(nullptr), mExtGrid(nullptr), mSweepingVoxelCount(0), mBoundaryVoxelCount(0), mSweepDirection(FastSweepingDomain::SWEEP_ALL), mIsInputSdf(true) | |
717 | { | ||
718 | 16 | } | |
719 | |||
720 | template <typename SdfGridT, typename ExtValueT> | ||
721 |
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34 | void FastSweeping<SdfGridT, ExtValueT>::clear() |
722 | { | ||
723 | mSdfGrid.reset(); | ||
724 | mExtGrid.reset(); | ||
725 | 34 | mSweepMask.clear(); | |
726 |
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34 | if (mExtGridInput) mExtGridInput.reset(); |
727 | 34 | mSweepingVoxelCount = mBoundaryVoxelCount = 0; | |
728 | 34 | mSweepDirection = FastSweepingDomain::SWEEP_ALL; | |
729 | 34 | mIsInputSdf = true; | |
730 | 34 | } | |
731 | |||
732 | template <typename SdfGridT, typename ExtValueT> | ||
733 | 16 | void FastSweeping<SdfGridT, ExtValueT>::computeSweepMaskLeafOrigins() | |
734 | { | ||
735 | // replace any inactive leaf nodes with tiles and voxelize any active tiles | ||
736 | |||
737 | 16 | pruneInactive(mSweepMask); | |
738 | mSweepMask.voxelizeActiveTiles(); | ||
739 | |||
740 | using LeafManagerT = tree::LeafManager<SweepMaskTreeT>; | ||
741 | using LeafT = typename SweepMaskTreeT::LeafNodeType; | ||
742 | 32 | LeafManagerT leafManager(mSweepMask); | |
743 | |||
744 |
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16 | mSweepMaskLeafOrigins.resize(leafManager.leafCount()); |
745 | 16 | std::atomic<size_t> sweepingVoxelCount{0}; | |
746 | 16871 | auto kernel = [&](const LeafT& leaf, size_t leafIdx) { | |
747 | 16855 | mSweepMaskLeafOrigins[leafIdx] = leaf.origin(); | |
748 | sweepingVoxelCount += leaf.onVoxelCount(); | ||
749 | }; | ||
750 |
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16 | leafManager.foreach(kernel, /*threaded=*/true, /*grainsize=*/1024); |
751 | |||
752 |
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16 | mBoundaryVoxelCount = 0; |
753 |
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16 | mSweepingVoxelCount = sweepingVoxelCount; |
754 |
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16 | if (mSdfGrid) { |
755 |
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16 | const size_t totalCount = mSdfGrid->constTree().activeVoxelCount(); |
756 |
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16 | assert( totalCount >= mSweepingVoxelCount ); |
757 | 16 | mBoundaryVoxelCount = totalCount - mSweepingVoxelCount; | |
758 | } | ||
759 | 16 | }// FastSweeping::computeSweepMaskLeafOrigins | |
760 | |||
761 | template <typename SdfGridT, typename ExtValueT> | ||
762 | 1 | bool FastSweeping<SdfGridT, ExtValueT>::initSdf(const SdfGridT &fogGrid, SdfValueT isoValue, bool isInputSdf) | |
763 | { | ||
764 | 1 | this->clear(); | |
765 | 1 | mSdfGrid = fogGrid.deepCopy();//very fast | |
766 | 1 | mIsInputSdf = isInputSdf; | |
767 | InitSdf kernel(*this); | ||
768 | 1 | kernel.run(isoValue); | |
769 | 1 | return this->isValid(); | |
770 | } | ||
771 | |||
772 | template <typename SdfGridT, typename ExtValueT> | ||
773 | template <typename OpT> | ||
774 | 6 | bool FastSweeping<SdfGridT, ExtValueT>::initExt(const SdfGridT &fogGrid, const OpT &op, const ExtValueT &background, SdfValueT isoValue, bool isInputSdf, FastSweepingDomain mode, const typename ExtGridT::ConstPtr extGrid) | |
775 | { | ||
776 |
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6 | if (mode != FastSweepingDomain::SWEEP_ALL) { |
777 | ✗ | if (!extGrid) | |
778 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping::initExt Calling initExt with mode != SWEEP_ALL requires an extension grid!"); | |
779 | ✗ | if (extGrid->transform() != fogGrid.transform()) | |
780 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping::initExt extension grid input should have the same transform as Fog/SDF grid!"); | |
781 | } | ||
782 | |||
783 | 6 | this->clear(); | |
784 | 12 | mSdfGrid = fogGrid.deepCopy();//very fast | |
785 | 6 | mExtGrid = createGrid<ExtGridT>( background ); | |
786 | 6 | mSweepDirection = mode; | |
787 | 6 | mIsInputSdf = isInputSdf; | |
788 |
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6 | if (mSweepDirection != FastSweepingDomain::SWEEP_ALL) { |
789 | ✗ | mExtGridInput = extGrid->deepCopy(); | |
790 | } | ||
791 | mExtGrid->topologyUnion( *mSdfGrid );//very fast | ||
792 | InitExt<OpT> kernel(*this); | ||
793 | 6 | kernel.run(isoValue, op); | |
794 | 6 | return this->isValid(); | |
795 | } | ||
796 | |||
797 | |||
798 | template <typename SdfGridT, typename ExtValueT> | ||
799 | 1 | bool FastSweeping<SdfGridT, ExtValueT>::initDilate(const SdfGridT &sdfGrid, int dilate, NearestNeighbors nn, FastSweepingDomain mode) | |
800 | { | ||
801 | 1 | this->clear(); | |
802 | 1 | mSdfGrid = sdfGrid.deepCopy();//very fast | |
803 | 1 | mSweepDirection = mode; | |
804 | 1 | DilateKernel kernel(*this); | |
805 |
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1 | kernel.run(dilate, nn); |
806 | 1 | return this->isValid(); | |
807 | } | ||
808 | |||
809 | template <typename SdfGridT, typename ExtValueT> | ||
810 | template<typename MaskTreeT> | ||
811 | 6 | bool FastSweeping<SdfGridT, ExtValueT>::initMask(const SdfGridT &sdfGrid, const Grid<MaskTreeT> &mask, bool ignoreActiveTiles) | |
812 | { | ||
813 | 6 | this->clear(); | |
814 | 12 | mSdfGrid = sdfGrid.deepCopy();//very fast | |
815 | |||
816 |
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6 | if (mSdfGrid->transform() != mask.transform()) { |
817 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping: Mask not aligned with the grid!"); | |
818 | } | ||
819 | |||
820 |
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6 | if (mask.getGridClass() == GRID_LEVEL_SET) { |
821 | using T = typename MaskTreeT::template ValueConverter<bool>::Type; | ||
822 | 4 | typename Grid<T>::Ptr tmp = sdfInteriorMask(mask);//might have active tiles | |
823 | tmp->tree().voxelizeActiveTiles();//multi-threaded | ||
824 | MaskKernel<T> kernel(*this); | ||
825 |
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4 | kernel.run(tmp->tree());//multi-threaded |
826 | } else { | ||
827 |
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4 | if (ignoreActiveTiles || !mask.tree().hasActiveTiles()) { |
828 | MaskKernel<MaskTreeT> kernel(*this); | ||
829 | ✗ | kernel.run(mask.tree());//multi-threaded | |
830 | } else { | ||
831 | using T = typename MaskTreeT::template ValueConverter<ValueMask>::Type; | ||
832 |
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4 | T tmp(mask.tree(), false, TopologyCopy());//multi-threaded |
833 | tmp.voxelizeActiveTiles(true);//multi-threaded | ||
834 | MaskKernel<T> kernel(*this); | ||
835 |
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2 | kernel.run(tmp);//multi-threaded |
836 | } | ||
837 | } | ||
838 | 6 | return this->isValid(); | |
839 | }// FastSweeping::initMask | ||
840 | |||
841 | template <typename SdfGridT, typename ExtValueT> | ||
842 |
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16 | void FastSweeping<SdfGridT, ExtValueT>::sweep(int nIter, bool finalize) |
843 | { | ||
844 |
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16 | if (!mSdfGrid) { |
845 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping::sweep called before initialization!"); | |
846 | } | ||
847 |
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16 | if (mExtGrid && mSweepDirection != FastSweepingDomain::SWEEP_ALL && !mExtGridInput) { |
848 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping: Trying to extend a field in one direction needs" | |
849 | " a non-null reference extension grid input."); | ||
850 | } | ||
851 |
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16 | if (this->boundaryVoxelCount() == 0) { |
852 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping: No boundary voxels found!"); | |
853 |
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16 | } else if (this->sweepingVoxelCount() == 0) { |
854 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping: No computing voxels found!"); | |
855 | } | ||
856 | |||
857 | // note: Sweeping kernel is non copy-constructible, so use a deque instead of a vector | ||
858 | 16 | std::deque<SweepingKernel> kernels; | |
859 |
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80 | for (int i = 0; i < 4; i++) kernels.emplace_back(*this); |
860 | |||
861 | { // compute voxel slices | ||
862 | #ifdef BENCHMARK_FAST_SWEEPING | ||
863 | util::CpuTimer timer("Computing voxel slices"); | ||
864 | #endif | ||
865 | |||
866 | // Exploiting nested parallelism - all voxel slice data is precomputed | ||
867 | tbb::task_group tasks; | ||
868 |
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81050199 | tasks.run([&] { kernels[0].computeVoxelSlices([](const Coord &a){ return a[0]+a[1]+a[2]; });/*+++ & ---*/ }); |
869 |
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81113294 | tasks.run([&] { kernels[1].computeVoxelSlices([](const Coord &a){ return a[0]+a[1]-a[2]; });/*++- & --+*/ }); |
870 |
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81112321 | tasks.run([&] { kernels[2].computeVoxelSlices([](const Coord &a){ return a[0]-a[1]+a[2]; });/*+-+ & -+-*/ }); |
871 |
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81102069 | tasks.run([&] { kernels[3].computeVoxelSlices([](const Coord &a){ return a[0]-a[1]-a[2]; });/*+-- & -++*/ }); |
872 |
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16 | tasks.wait(); |
873 | |||
874 | #ifdef BENCHMARK_FAST_SWEEPING | ||
875 | timer.stop(); | ||
876 | #endif | ||
877 | } | ||
878 | |||
879 | // perform nIter iterations of bi-directional sweeping in all directions | ||
880 |
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32 | for (int i = 0; i < nIter; ++i) { |
881 |
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80 | for (SweepingKernel& kernel : kernels) kernel.sweep(); |
882 | } | ||
883 | |||
884 |
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16 | if (finalize) { |
885 | #ifdef BENCHMARK_FAST_SWEEPING | ||
886 | util::CpuTimer timer("Computing extrema values"); | ||
887 | #endif | ||
888 | MinMaxKernel kernel; | ||
889 |
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16 | auto e = kernel.run(*mSdfGrid);//multi-threaded |
890 | //auto e = extrema(mGrid->beginValueOn());// 100x slower!!!! | ||
891 | #ifdef BENCHMARK_FAST_SWEEPING | ||
892 | std::cerr << "Min = " << e.min() << " Max = " << e.max() << std::endl; | ||
893 | timer.restart("Changing asymmetric background value"); | ||
894 | #endif | ||
895 |
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16 | changeAsymmetricLevelSetBackground(mSdfGrid->tree(), e.max(), e.min());//multi-threaded |
896 | |||
897 | #ifdef BENCHMARK_FAST_SWEEPING | ||
898 | timer.stop(); | ||
899 | #endif | ||
900 | } | ||
901 | 16 | }// FastSweeping::sweep | |
902 | |||
903 | /// Private class of FastSweeping to quickly compute the extrema | ||
904 | /// values of the active voxels in the leaf nodes. Several orders | ||
905 | /// of magnitude faster than tools::extrema! | ||
906 | template <typename SdfGridT, typename ExtValueT> | ||
907 | struct FastSweeping<SdfGridT, ExtValueT>::MinMaxKernel | ||
908 | { | ||
909 | using LeafMgr = tree::LeafManager<const SdfTreeT>; | ||
910 | using LeafRange = typename LeafMgr::LeafRange; | ||
911 |
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8 | MinMaxKernel() : mMin(std::numeric_limits<SdfValueT>::max()), mMax(-mMin) {} |
912 | 31 | MinMaxKernel(MinMaxKernel& other, tbb::split) : mMin(other.mMin), mMax(other.mMax) {} | |
913 | |||
914 | 16 | math::MinMax<SdfValueT> run(const SdfGridT &grid) | |
915 | { | ||
916 | 16 | LeafMgr mgr(grid.tree());// super fast | |
917 |
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16 | tbb::parallel_reduce(mgr.leafRange(), *this); |
918 | 16 | return math::MinMax<SdfValueT>(mMin, mMax); | |
919 | } | ||
920 | |||
921 | 2228 | void operator()(const LeafRange& r) | |
922 | { | ||
923 |
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42476 | for (auto leafIter = r.begin(); leafIter; ++leafIter) { |
924 |
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11051618 | for (auto voxelIter = leafIter->beginValueOn(); voxelIter; ++voxelIter) { |
925 | 11011370 | const SdfValueT v = *voxelIter; | |
926 |
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11011370 | if (v < mMin) mMin = v; |
927 |
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11011370 | if (v > mMax) mMax = v; |
928 | } | ||
929 | } | ||
930 | 2228 | } | |
931 | |||
932 | void join(const MinMaxKernel& other) | ||
933 | { | ||
934 |
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31 | if (other.mMin < mMin) mMin = other.mMin; |
935 |
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31 | if (other.mMax > mMax) mMax = other.mMax; |
936 | } | ||
937 | |||
938 | SdfValueT mMin, mMax; | ||
939 | };// FastSweeping::MinMaxKernel | ||
940 | |||
941 | //////////////////////////////////////////////////////////////////////////////// | ||
942 | |||
943 | /// Private class of FastSweeping to perform multi-threaded initialization | ||
944 | template <typename SdfGridT, typename ExtValueT> | ||
945 | struct FastSweeping<SdfGridT, ExtValueT>::DilateKernel | ||
946 | { | ||
947 | using LeafRange = typename tree::LeafManager<SdfTreeT>::LeafRange; | ||
948 | 1 | DilateKernel(FastSweeping &parent) | |
949 | : mParent(&parent), | ||
950 |
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1 | mBackground(parent.mSdfGrid->background()) |
951 | { | ||
952 |
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1 | mSdfGridInput = mParent->mSdfGrid->deepCopy(); |
953 | 1 | } | |
954 | DilateKernel(const DilateKernel &parent) = default;// for tbb::parallel_for | ||
955 | DilateKernel& operator=(const DilateKernel&) = delete; | ||
956 | |||
957 | 1 | void run(int dilation, NearestNeighbors nn) | |
958 | { | ||
959 | #ifdef BENCHMARK_FAST_SWEEPING | ||
960 | util::CpuTimer timer("Construct LeafManager"); | ||
961 | #endif | ||
962 | 2 | tree::LeafManager<SdfTreeT> mgr(mParent->mSdfGrid->tree());// super fast | |
963 | |||
964 | #ifdef BENCHMARK_FAST_SWEEPING | ||
965 | timer.restart("Changing background value"); | ||
966 | #endif | ||
967 | static const SdfValueT Unknown = std::numeric_limits<SdfValueT>::max(); | ||
968 |
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1 | changeLevelSetBackground(mgr, Unknown);//multi-threaded |
969 | |||
970 | #ifdef BENCHMARK_FAST_SWEEPING | ||
971 | timer.restart("Dilating and updating mgr (parallel)"); | ||
972 | //timer.restart("Dilating and updating mgr (serial)"); | ||
973 | #endif | ||
974 | |||
975 | const int delta = 5; | ||
976 |
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2 | for (int i=0, d = dilation/delta; i<d; ++i) dilateActiveValues(mgr, delta, nn, IGNORE_TILES); |
977 |
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1 | dilateActiveValues(mgr, dilation % delta, nn, IGNORE_TILES); |
978 | //for (int i=0, n=5, d=dilation/n; i<d; ++i) dilateActiveValues(mgr, n, nn, IGNORE_TILES); | ||
979 | //dilateVoxels(mgr, dilation, nn); | ||
980 | |||
981 | #ifdef BENCHMARK_FAST_SWEEPING | ||
982 | timer.restart("Initializing grid and sweep mask"); | ||
983 | #endif | ||
984 | |||
985 |
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1 | mParent->mSweepMask.clear(); |
986 |
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1 | mParent->mSweepMask.topologyUnion(mParent->mSdfGrid->constTree()); |
987 | |||
988 | using LeafManagerT = tree::LeafManager<typename SdfGridT::TreeType>; | ||
989 | using LeafT = typename SdfGridT::TreeType::LeafNodeType; | ||
990 | |||
991 | 1 | const FastSweepingDomain mode = mParent->mSweepDirection; | |
992 | |||
993 |
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2 | LeafManagerT leafManager(mParent->mSdfGrid->tree()); |
994 | |||
995 | 5636 | auto kernel = [&](LeafT& leaf, size_t /*leafIdx*/) { | |
996 | static const SdfValueT Unknown = std::numeric_limits<SdfValueT>::max(); | ||
997 | 2818 | const SdfValueT background = mBackground;//local copy | |
998 | 2818 | auto* maskLeaf = mParent->mSweepMask.probeLeaf(leaf.origin()); | |
999 | SdfConstAccT sdfInputAcc(mSdfGridInput->tree()); | ||
1000 |
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2818 | assert(maskLeaf); |
1001 |
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956004 | for (auto voxelIter = leaf.beginValueOn(); voxelIter; ++voxelIter) { |
1002 | 953186 | const SdfValueT value = *voxelIter; | |
1003 | SdfValueT inputValue; | ||
1004 |
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953186 | const Coord ijk = voxelIter.getCoord(); |
1005 | |||
1006 |
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953186 | if (math::Abs(value) < background) {// disable boundary voxels from the mask tree |
1007 | 270638 | maskLeaf->setValueOff(voxelIter.pos()); | |
1008 | } else { | ||
1009 |
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682548 | switch (mode) { |
1010 | 682548 | case FastSweepingDomain::SWEEP_ALL : | |
1011 |
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955950 | voxelIter.setValue(value > 0 ? Unknown : -Unknown); |
1012 | 682548 | break; | |
1013 | ✗ | case FastSweepingDomain::SWEEP_GREATER_THAN_ISOVALUE : | |
1014 | ✗ | if (value > 0) voxelIter.setValue(Unknown); | |
1015 | else { | ||
1016 | ✗ | maskLeaf->setValueOff(voxelIter.pos()); | |
1017 | ✗ | bool isInputOn = sdfInputAcc.probeValue(ijk, inputValue); | |
1018 | ✗ | if ( !isInputOn ) voxelIter.setValueOff(); | |
1019 | ✗ | else voxelIter.setValue(inputValue); | |
1020 | } | ||
1021 | break; | ||
1022 | ✗ | case FastSweepingDomain::SWEEP_LESS_THAN_ISOVALUE : | |
1023 | ✗ | if (value < 0) voxelIter.setValue(-Unknown); | |
1024 | else { | ||
1025 | ✗ | maskLeaf->setValueOff(voxelIter.pos()); | |
1026 | ✗ | bool isInputOn = sdfInputAcc.probeValue(ijk, inputValue); | |
1027 | ✗ | if ( !isInputOn ) voxelIter.setValueOff(); | |
1028 | ✗ | else voxelIter.setValue(inputValue); | |
1029 | } | ||
1030 | break; | ||
1031 | } | ||
1032 | } | ||
1033 | } | ||
1034 | }; | ||
1035 | |||
1036 |
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1 | leafManager.foreach( kernel ); |
1037 | |||
1038 | // cache the leaf node origins for fast lookup in the sweeping kernels | ||
1039 |
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1 | mParent->computeSweepMaskLeafOrigins(); |
1040 | |||
1041 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1042 | timer.stop(); | ||
1043 | #endif | ||
1044 | 1 | }// FastSweeping::DilateKernel::run | |
1045 | |||
1046 | // Private member data of DilateKernel | ||
1047 | FastSweeping *mParent; | ||
1048 | const SdfValueT mBackground; | ||
1049 | typename SdfGridT::ConstPtr mSdfGridInput; | ||
1050 | };// FastSweeping::DilateKernel | ||
1051 | |||
1052 | //////////////////////////////////////////////////////////////////////////////// | ||
1053 | |||
1054 | template <typename SdfGridT, typename ExtValueT> | ||
1055 | struct FastSweeping<SdfGridT, ExtValueT>::InitSdf | ||
1056 | { | ||
1057 | using LeafRange = typename tree::LeafManager<SdfTreeT>::LeafRange; | ||
1058 | 1 | InitSdf(FastSweeping &parent): mParent(&parent), | |
1059 | 1 | mSdfGrid(parent.mSdfGrid.get()), mIsoValue(0), mAboveSign(0) {} | |
1060 | InitSdf(const InitSdf&) = default;// for tbb::parallel_for | ||
1061 | InitSdf& operator=(const InitSdf&) = delete; | ||
1062 | |||
1063 | 1 | void run(SdfValueT isoValue) | |
1064 | { | ||
1065 | 1 | mIsoValue = isoValue; | |
1066 |
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1 | mAboveSign = mParent->mIsInputSdf ? SdfValueT(1) : SdfValueT(-1); |
1067 | 1 | SdfTreeT &tree = mSdfGrid->tree();//sdf | |
1068 | const bool hasActiveTiles = tree.hasActiveTiles(); | ||
1069 | |||
1070 |
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1 | if (mParent->mIsInputSdf && hasActiveTiles) { |
1071 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping: A SDF should not have active tiles!"); | |
1072 | } | ||
1073 | |||
1074 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1075 | util::CpuTimer timer("Initialize voxels"); | ||
1076 | #endif | ||
1077 | 1 | mParent->mSweepMask.clear(); | |
1078 | 1 | mParent->mSweepMask.topologyUnion(mParent->mSdfGrid->constTree()); | |
1079 | |||
1080 | {// Process all voxels | ||
1081 | 2 | tree::LeafManager<SdfTreeT> mgr(tree, 1);// we need one auxiliary buffer | |
1082 |
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1 | tbb::parallel_for(mgr.leafRange(32), *this);//multi-threaded |
1083 |
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1 | mgr.swapLeafBuffer(1);//swap voxel values |
1084 | } | ||
1085 | |||
1086 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1087 | timer.restart("Initialize tiles - new"); | ||
1088 | #endif | ||
1089 | // Process all tiles | ||
1090 | 2 | tree::NodeManager<SdfTreeT, SdfTreeT::RootNodeType::LEVEL-1> mgr(tree); | |
1091 |
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1 | mgr.foreachBottomUp(*this);//multi-threaded |
1092 |
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1 | tree.root().setBackground(std::numeric_limits<SdfValueT>::max(), false); |
1093 |
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1 | if (hasActiveTiles) tree.voxelizeActiveTiles();//multi-threaded |
1094 | |||
1095 | // cache the leaf node origins for fast lookup in the sweeping kernels | ||
1096 | |||
1097 |
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1 | mParent->computeSweepMaskLeafOrigins(); |
1098 | 1 | }// FastSweeping::InitSdf::run | |
1099 | |||
1100 | 32 | void operator()(const LeafRange& r) const | |
1101 | { | ||
1102 | 32 | SweepMaskAccT sweepMaskAcc(mParent->mSweepMask); | |
1103 | 32 | math::GradStencil<SdfGridT, false> stencil(*mSdfGrid); | |
1104 | 32 | const SdfValueT isoValue = mIsoValue, above = mAboveSign*std::numeric_limits<SdfValueT>::max();//local copy | |
1105 |
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32 | const SdfValueT h = mAboveSign*static_cast<SdfValueT>(mSdfGrid->voxelSize()[0]);//Voxel size |
1106 |
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820 | for (auto leafIter = r.begin(); leafIter; ++leafIter) { |
1107 |
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788 | SdfValueT* sdf = leafIter.buffer(1).data(); |
1108 |
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405032 | for (auto voxelIter = leafIter->beginValueAll(); voxelIter; ++voxelIter) { |
1109 | 403456 | const SdfValueT value = *voxelIter; | |
1110 | 403456 | const bool isAbove = value > isoValue; | |
1111 |
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403456 | if (!voxelIter.isValueOn()) {// inactive voxels |
1112 |
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184429 | sdf[voxelIter.pos()] = isAbove ? above : -above; |
1113 | } else {// active voxels | ||
1114 |
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219027 | const Coord ijk = voxelIter.getCoord(); |
1115 | stencil.moveTo(ijk, value); | ||
1116 | 219027 | const auto mask = stencil.intersectionMask( isoValue ); | |
1117 |
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219027 | if (mask.none()) {// most common case |
1118 |
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169867 | sdf[voxelIter.pos()] = isAbove ? above : -above; |
1119 | } else {// compute distance to iso-surface | ||
1120 | // disable boundary voxels from the mask tree | ||
1121 | sweepMaskAcc.setValueOff(ijk); | ||
1122 |
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49160 | const SdfValueT delta = value - isoValue;//offset relative to iso-value |
1123 | if (math::isApproxZero(delta)) {//voxel is on the iso-surface | ||
1124 | ✗ | sdf[voxelIter.pos()] = 0; | |
1125 | } else {//voxel is neighboring the iso-surface | ||
1126 | SdfValueT sum = 0; | ||
1127 |
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196640 | for (int i=0; i<6;) { |
1128 | SdfValueT d = std::numeric_limits<SdfValueT>::max(), d2; | ||
1129 |
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147480 | if (mask.test(i++)) d = math::Abs(delta/(value-stencil.getValue(i))); |
1130 |
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147480 | if (mask.test(i++)) { |
1131 |
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44358 | d2 = math::Abs(delta/(value-stencil.getValue(i))); |
1132 |
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44358 | if (d2 < d) d = d2; |
1133 | } | ||
1134 |
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147480 | if (d < std::numeric_limits<SdfValueT>::max()) sum += 1/(d*d); |
1135 | } | ||
1136 |
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49160 | sdf[voxelIter.pos()] = isAbove ? h / math::Sqrt(sum) : -h / math::Sqrt(sum); |
1137 | }// voxel is neighboring the iso-surface | ||
1138 | }// intersecting voxels | ||
1139 | }// active voxels | ||
1140 | }// loop over voxels | ||
1141 | }// loop over leaf nodes | ||
1142 | 32 | }// FastSweeping::InitSdf::operator(const LeafRange&) | |
1143 | |||
1144 | template<typename RootOrInternalNodeT> | ||
1145 | 34 | void operator()(const RootOrInternalNodeT& node) const | |
1146 | { | ||
1147 | 34 | const SdfValueT isoValue = mIsoValue, above = mAboveSign*std::numeric_limits<SdfValueT>::max(); | |
1148 |
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588268 | for (auto it = node.cbeginValueAll(); it; ++it) { |
1149 | SdfValueT& v = const_cast<SdfValueT&>(*it); | ||
1150 |
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588232 | v = v > isoValue ? above : -above; |
1151 | }//loop over all tiles | ||
1152 | 34 | }// FastSweeping::InitSdf::operator()(const RootOrInternalNodeT&) | |
1153 | |||
1154 | // Public member data | ||
1155 | FastSweeping *mParent; | ||
1156 | SdfGridT *mSdfGrid;//raw pointer, i.e. lock free | ||
1157 | SdfValueT mIsoValue; | ||
1158 | SdfValueT mAboveSign;//sign of distance values above the iso-value | ||
1159 | };// FastSweeping::InitSdf | ||
1160 | |||
1161 | |||
1162 | /// Private class of FastSweeping to perform multi-threaded initialization | ||
1163 | template <typename SdfGridT, typename ExtValueT> | ||
1164 | template <typename OpT> | ||
1165 | struct FastSweeping<SdfGridT, ExtValueT>::InitExt | ||
1166 | { | ||
1167 | using LeafRange = typename tree::LeafManager<SdfTreeT>::LeafRange; | ||
1168 | using OpPoolT = tbb::enumerable_thread_specific<OpT>; | ||
1169 | 3 | InitExt(FastSweeping &parent) : mParent(&parent), | |
1170 | mOpPool(nullptr), mSdfGrid(parent.mSdfGrid.get()), | ||
1171 | 3 | mExtGrid(parent.mExtGrid.get()), mIsoValue(0), mAboveSign(0) {} | |
1172 | InitExt(const InitExt&) = default;// for tbb::parallel_for | ||
1173 | InitExt& operator=(const InitExt&) = delete; | ||
1174 | 6 | void run(SdfValueT isoValue, const OpT &opPrototype) | |
1175 | { | ||
1176 | static_assert(std::is_convertible<decltype(opPrototype(Vec3d(0))),ExtValueT>::value, "Invalid return type of functor"); | ||
1177 |
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6 | if (!mExtGrid) { |
1178 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping::InitExt expected an extension grid!"); | |
1179 | } | ||
1180 | |||
1181 |
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6 | mAboveSign = mParent->mIsInputSdf ? SdfValueT(1) : SdfValueT(-1); |
1182 | 6 | mIsoValue = isoValue; | |
1183 | 6 | auto &tree1 = mSdfGrid->tree(); | |
1184 | auto &tree2 = mExtGrid->tree(); | ||
1185 | const bool hasActiveTiles = tree1.hasActiveTiles();//very fast | ||
1186 | |||
1187 |
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6 | if (mParent->mIsInputSdf && hasActiveTiles) { |
1188 | ✗ | OPENVDB_THROW(RuntimeError, "FastSweeping: A SDF should not have active tiles!"); | |
1189 | } | ||
1190 | |||
1191 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1192 | util::CpuTimer timer("Initialize voxels"); | ||
1193 | #endif | ||
1194 | |||
1195 | 6 | mParent->mSweepMask.clear(); | |
1196 | 6 | mParent->mSweepMask.topologyUnion(mParent->mSdfGrid->constTree()); | |
1197 | |||
1198 | {// Process all voxels | ||
1199 | // Define thread-local operators | ||
1200 | 12 | OpPoolT opPool(opPrototype); | |
1201 | 6 | mOpPool = &opPool; | |
1202 | |||
1203 |
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12 | tree::LeafManager<SdfTreeT> mgr(tree1, 1);// we need one auxiliary buffer |
1204 |
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6 | tbb::parallel_for(mgr.leafRange(32), *this);//multi-threaded |
1205 |
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6 | mgr.swapLeafBuffer(1);//swap out auxiliary buffer |
1206 | } | ||
1207 | |||
1208 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1209 | timer.restart("Initialize tiles"); | ||
1210 | #endif | ||
1211 | {// Process all tiles | ||
1212 | 12 | tree::NodeManager<SdfTreeT, SdfTreeT::RootNodeType::LEVEL-1> mgr(tree1); | |
1213 |
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6 | mgr.foreachBottomUp(*this);//multi-threaded |
1214 |
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6 | tree1.root().setBackground(std::numeric_limits<SdfValueT>::max(), false); |
1215 |
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6 | if (hasActiveTiles) { |
1216 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1217 | timer.restart("Voxelizing active tiles"); | ||
1218 | #endif | ||
1219 | tree1.voxelizeActiveTiles();//multi-threaded | ||
1220 | tree2.voxelizeActiveTiles();//multi-threaded | ||
1221 | } | ||
1222 | } | ||
1223 | |||
1224 | // cache the leaf node origins for fast lookup in the sweeping kernels | ||
1225 | |||
1226 | 6 | mParent->computeSweepMaskLeafOrigins(); | |
1227 | |||
1228 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1229 | timer.stop(); | ||
1230 | #endif | ||
1231 | 6 | }// FastSweeping::InitExt::run | |
1232 | |||
1233 | // int implements an update if minD needs to be updated | ||
1234 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<std::is_same<ExtT, int>::value, int>::type = 0> | ||
1235 | void sumHelper(ExtT& sum2, ExtT ext, bool update, const SdfT& /* d2 */) const { if (update) sum2 = ext; }// int implementation | ||
1236 | |||
1237 | // non-int implements a weighted sum | ||
1238 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<!std::is_same<ExtT, int>::value, int>::type = 0> | ||
1239 | 465090 | void sumHelper(ExtT& sum2, ExtT ext, bool /* update */, const SdfT& d2) const { sum2 += static_cast<ExtValueT>(d2 * ext); }// non-int implementation | |
1240 | |||
1241 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<std::is_same<ExtT, int>::value, int>::type = 0> | ||
1242 | ExtT extValHelper(ExtT extSum, const SdfT& /* sdfSum */) const { return extSum; }// int implementation | ||
1243 | |||
1244 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<!std::is_same<ExtT, int>::value, int>::type = 0> | ||
1245 | 466572 | ExtT extValHelper(ExtT extSum, const SdfT& sdfSum) const {return ExtT((SdfT(1) / sdfSum) * extSum); }// non-int implementation | |
1246 | |||
1247 | 576 | void operator()(const LeafRange& r) const | |
1248 | { | ||
1249 | 576 | ExtAccT acc(mExtGrid->tree()); | |
1250 | 576 | SweepMaskAccT sweepMaskAcc(mParent->mSweepMask); | |
1251 | 576 | math::GradStencil<SdfGridT, false> stencil(*mSdfGrid); | |
1252 |
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576 | const math::Transform& xform = mExtGrid->transform(); |
1253 |
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576 | typename OpPoolT::reference op = mOpPool->local(); |
1254 | 576 | const SdfValueT isoValue = mIsoValue, above = mAboveSign*std::numeric_limits<SdfValueT>::max();//local copy | |
1255 |
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576 | const SdfValueT h = mAboveSign*static_cast<SdfValueT>(mSdfGrid->voxelSize()[0]);//Voxel size |
1256 |
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18252 | for (auto leafIter = r.begin(); leafIter; ++leafIter) { |
1257 |
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17676 | SdfValueT *sdf = leafIter.buffer(1).data(); |
1258 |
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17676 | ExtValueT *ext = acc.probeLeaf(leafIter->origin())->buffer().data();//should be safe! |
1259 |
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9085464 | for (auto voxelIter = leafIter->beginValueAll(); voxelIter; ++voxelIter) { |
1260 | 9050112 | const SdfValueT value = *voxelIter; | |
1261 | 9050112 | const bool isAbove = value > isoValue; | |
1262 |
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9050112 | if (!voxelIter.isValueOn()) {// inactive voxels |
1263 |
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5596098 | sdf[voxelIter.pos()] = isAbove ? above : -above; |
1264 | } else {// active voxels | ||
1265 |
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3454014 | const Coord ijk = voxelIter.getCoord(); |
1266 | stencil.moveTo(ijk, value); | ||
1267 | 3454014 | const auto mask = stencil.intersectionMask( isoValue ); | |
1268 |
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3454014 | if (mask.none()) {// no zero-crossing neighbors, most common case |
1269 |
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2520270 | sdf[voxelIter.pos()] = isAbove ? above : -above; |
1270 | // the ext grid already has its active values set to the background value | ||
1271 | } else {// compute distance to iso-surface | ||
1272 | // disable boundary voxels from the mask tree | ||
1273 | sweepMaskAcc.setValueOff(ijk); | ||
1274 |
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933744 | const SdfValueT delta = value - isoValue;//offset relative to iso-value |
1275 | if (math::isApproxZero(delta)) {//voxel is on the iso-surface | ||
1276 |
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600 | sdf[voxelIter.pos()] = 0; |
1277 | 600 | ext[voxelIter.pos()] = ExtValueT(op(xform.indexToWorld(ijk))); | |
1278 | } else {//voxel is neighboring the iso-surface | ||
1279 | SdfValueT sum1 = 0; | ||
1280 | 417412 | ExtValueT sum2 = zeroVal<ExtValueT>(); | |
1281 | // minD is used to update sum2 in the integer case, | ||
1282 | // where we choose the value of the extension grid corresponding to | ||
1283 | // the smallest value of d in the 6 direction neighboring the current | ||
1284 | // voxel. | ||
1285 | SdfValueT minD = std::numeric_limits<SdfValueT>::max(); | ||
1286 |
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3732576 | for (int n=0, i=0; i<6;) { |
1287 | SdfValueT d = std::numeric_limits<SdfValueT>::max(), d2; | ||
1288 |
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2799432 | if (mask.test(i++)) { |
1289 | 841464 | d = math::Abs(delta/(value-stencil.getValue(i))); | |
1290 | n = i - 1; | ||
1291 | } | ||
1292 |
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2799432 | if (mask.test(i++)) { |
1293 |
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841464 | d2 = math::Abs(delta/(value-stencil.getValue(i))); |
1294 |
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841464 | if (d2 < d) { |
1295 | d = d2; | ||
1296 | n = i - 1; | ||
1297 | } | ||
1298 | } | ||
1299 |
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2799432 | if (d < std::numeric_limits<SdfValueT>::max()) { |
1300 | 1682928 | d2 = 1/(d*d); | |
1301 |
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1682928 | sum1 += d2; |
1302 | 1682928 | const Vec3R xyz(static_cast<SdfValueT>(ijk[0])+d*static_cast<SdfValueT>(FastSweeping::mOffset[n][0]), | |
1303 | 1682928 | static_cast<SdfValueT>(ijk[1])+d*static_cast<SdfValueT>(FastSweeping::mOffset[n][1]), | |
1304 |
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1682928 | static_cast<SdfValueT>(ijk[2])+d*static_cast<SdfValueT>(FastSweeping::mOffset[n][2])); |
1305 | // If current d is less than minD, update minD | ||
1306 | 1682928 | sumHelper(sum2, ExtValueT(op(xform.indexToWorld(xyz))), d < minD, d2); | |
1307 |
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1682928 | if (d < minD) minD = d; |
1308 | } | ||
1309 | }//look over six cases | ||
1310 |
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933144 | ext[voxelIter.pos()] = extValHelper(sum2, sum1); |
1311 |
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933144 | sdf[voxelIter.pos()] = isAbove ? h / math::Sqrt(sum1) : -h / math::Sqrt(sum1); |
1312 | }// voxel is neighboring the iso-surface | ||
1313 | }// intersecting voxels | ||
1314 | }// active voxels | ||
1315 | }// loop over voxels | ||
1316 | }// loop over leaf nodes | ||
1317 | 576 | }// FastSweeping::InitExt::operator(const LeafRange& r) | |
1318 | |||
1319 | template<typename RootOrInternalNodeT> | ||
1320 | 102 | void operator()(const RootOrInternalNodeT& node) const | |
1321 | { | ||
1322 | 102 | const SdfValueT isoValue = mIsoValue, above = mAboveSign*std::numeric_limits<SdfValueT>::max(); | |
1323 |
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1751856 | for (auto it = node.cbeginValueAll(); it; ++it) { |
1324 | SdfValueT& v = const_cast<SdfValueT&>(*it); | ||
1325 |
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1751748 | v = v > isoValue ? above : -above; |
1326 | }//loop over all tiles | ||
1327 | 102 | } | |
1328 | // Public member data | ||
1329 | FastSweeping *mParent; | ||
1330 | OpPoolT *mOpPool; | ||
1331 | SdfGridT *mSdfGrid; | ||
1332 | ExtGridT *mExtGrid; | ||
1333 | SdfValueT mIsoValue; | ||
1334 | SdfValueT mAboveSign;//sign of distance values above the iso-value | ||
1335 | };// FastSweeping::InitExt | ||
1336 | |||
1337 | /// Private class of FastSweeping to perform multi-threaded initialization | ||
1338 | template <typename SdfGridT, typename ExtValueT> | ||
1339 | template <typename MaskTreeT> | ||
1340 | struct FastSweeping<SdfGridT, ExtValueT>::MaskKernel | ||
1341 | { | ||
1342 | using LeafRange = typename tree::LeafManager<const MaskTreeT>::LeafRange; | ||
1343 | 3 | MaskKernel(FastSweeping &parent) : mParent(&parent), | |
1344 |
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3 | mSdfGrid(parent.mSdfGrid.get()) {} |
1345 | MaskKernel(const MaskKernel &parent) = default;// for tbb::parallel_for | ||
1346 | MaskKernel& operator=(const MaskKernel&) = delete; | ||
1347 | |||
1348 | 6 | void run(const MaskTreeT &mask) | |
1349 | { | ||
1350 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1351 | util::CpuTimer timer; | ||
1352 | #endif | ||
1353 | 6 | auto &lsTree = mSdfGrid->tree(); | |
1354 | |||
1355 | static const SdfValueT Unknown = std::numeric_limits<SdfValueT>::max(); | ||
1356 | |||
1357 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1358 | timer.restart("Changing background value"); | ||
1359 | #endif | ||
1360 | 6 | changeLevelSetBackground(lsTree, Unknown);//multi-threaded | |
1361 | |||
1362 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1363 | timer.restart("Union with mask");//multi-threaded | ||
1364 | #endif | ||
1365 | lsTree.topologyUnion(mask);//multi-threaded | ||
1366 | |||
1367 | // ignore active tiles since the input grid is assumed to be a level set | ||
1368 | 12 | tree::LeafManager<const MaskTreeT> mgr(mask);// super fast | |
1369 | |||
1370 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1371 | timer.restart("Initializing grid and sweep mask"); | ||
1372 | #endif | ||
1373 | |||
1374 |
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6 | mParent->mSweepMask.clear(); |
1375 |
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6 | mParent->mSweepMask.topologyUnion(mParent->mSdfGrid->constTree()); |
1376 | |||
1377 | using LeafManagerT = tree::LeafManager<SweepMaskTreeT>; | ||
1378 | using LeafT = typename SweepMaskTreeT::LeafNodeType; | ||
1379 |
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12 | LeafManagerT leafManager(mParent->mSweepMask); |
1380 | |||
1381 | 12990 | auto kernel = [&](LeafT& leaf, size_t /*leafIdx*/) { | |
1382 | static const SdfValueT Unknown = std::numeric_limits<SdfValueT>::max(); | ||
1383 | 6492 | SdfAccT acc(mSdfGrid->tree()); | |
1384 | // The following hack is safe due to the topology union in | ||
1385 | // init and the fact that SdfValueT is known to be a floating point! | ||
1386 | 6492 | SdfValueT *data = acc.probeLeaf(leaf.origin())->buffer().data(); | |
1387 |
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2004701 | for (auto voxelIter = leaf.beginValueOn(); voxelIter; ++voxelIter) {// mask voxels |
1388 |
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1998209 | if (math::Abs( data[voxelIter.pos()] ) < Unknown ) { |
1389 | // disable boundary voxels from the mask tree | ||
1390 | 811914 | voxelIter.setValue(false); | |
1391 | } | ||
1392 | } | ||
1393 | }; | ||
1394 |
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6 | leafManager.foreach( kernel ); |
1395 | |||
1396 | // cache the leaf node origins for fast lookup in the sweeping kernels | ||
1397 |
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6 | mParent->computeSweepMaskLeafOrigins(); |
1398 | |||
1399 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1400 | timer.stop(); | ||
1401 | #endif | ||
1402 | }// FastSweeping::MaskKernel::run | ||
1403 | |||
1404 | // Private member data of MaskKernel | ||
1405 | FastSweeping *mParent; | ||
1406 | SdfGridT *mSdfGrid;//raw pointer, i.e. lock free | ||
1407 | };// FastSweeping::MaskKernel | ||
1408 | |||
1409 | /// @brief Private class of FastSweeping to perform concurrent fast sweeping in two directions | ||
1410 | template <typename SdfGridT, typename ExtValueT> | ||
1411 | struct FastSweeping<SdfGridT, ExtValueT>::SweepingKernel | ||
1412 | { | ||
1413 | 32 | SweepingKernel(FastSweeping &parent) : mParent(&parent) {} | |
1414 | SweepingKernel(const SweepingKernel&) = delete; | ||
1415 | SweepingKernel& operator=(const SweepingKernel&) = delete; | ||
1416 | |||
1417 | /// Main method that performs concurrent bi-directional sweeps | ||
1418 | template<typename HashOp> | ||
1419 | 64 | void computeVoxelSlices(HashOp hash) | |
1420 | { | ||
1421 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1422 | util::CpuTimer timer; | ||
1423 | #endif | ||
1424 | |||
1425 | // mask of the active voxels to be solved for, i.e. excluding boundary voxels | ||
1426 | 64 | const SweepMaskTreeT& maskTree = mParent->mSweepMask; | |
1427 | |||
1428 | using LeafManagerT = typename tree::LeafManager<const SweepMaskTreeT>; | ||
1429 | using LeafT = typename SweepMaskTreeT::LeafNodeType; | ||
1430 | 128 | LeafManagerT leafManager(maskTree); | |
1431 | |||
1432 | // compute the leaf node slices that have active voxels in them | ||
1433 | // the sliding window of the has keys is -14 to 21 (based on an 8x8x8 leaf node | ||
1434 | // and the extrema hash values i-j-k and i+j+k), but we use a larger mask window here to | ||
1435 | // easily accommodate any leaf dimension. The mask offset is used to be able to | ||
1436 | // store this in a fixed-size byte array | ||
1437 | constexpr int maskOffset = LeafT::DIM * 3; | ||
1438 | constexpr int maskRange = maskOffset * 2; | ||
1439 | |||
1440 | // mark each possible slice in each leaf node that has one or more active voxels in it | ||
1441 |
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64 | std::vector<int8_t> leafSliceMasks(leafManager.leafCount()*maskRange); |
1442 | 15763308 | auto kernel1 = [&](const LeafT& leaf, size_t leafIdx) { | |
1443 | 67420 | const size_t leafOffset = leafIdx * maskRange; | |
1444 |
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15695824 | for (auto voxelIter = leaf.cbeginValueOn(); voxelIter; ++voxelIter) { |
1445 | 15628404 | const Coord ijk = LeafT::offsetToLocalCoord(voxelIter.pos()); | |
1446 | 15628404 | leafSliceMasks[leafOffset + hash(ijk) + maskOffset] = uint8_t(1); | |
1447 | } | ||
1448 | }; | ||
1449 |
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64 | leafManager.foreach( kernel1 ); |
1450 | |||
1451 | // compute the voxel slice map using a thread-local-storage hash map | ||
1452 | // the key of the hash map is the slice index of the voxel coord (ijk.x() + ijk.y() + ijk.z()) | ||
1453 | // the values are an array of indices for every leaf that has active voxels with this slice index | ||
1454 | using ThreadLocalMap = std::unordered_map</*voxelSliceKey=*/int64_t, /*leafIdx=*/std::deque<size_t>>; | ||
1455 |
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64 | tbb::enumerable_thread_specific<ThreadLocalMap> pool; |
1456 | 67484 | auto kernel2 = [&](const LeafT& leaf, size_t leafIdx) { | |
1457 | ThreadLocalMap& map = pool.local(); | ||
1458 | const Coord& origin = leaf.origin(); | ||
1459 | 67420 | const int64_t leafKey = hash(origin); | |
1460 | 67420 | const size_t leafOffset = leafIdx * maskRange; | |
1461 |
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3303580 | for (int sliceIdx = 0; sliceIdx < maskRange; sliceIdx++) { |
1462 |
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3236160 | if (leafSliceMasks[leafOffset + sliceIdx] == uint8_t(1)) { |
1463 | 1081655 | const int64_t voxelSliceKey = leafKey+sliceIdx-maskOffset; | |
1464 | 1081655 | map[voxelSliceKey].emplace_back(leafIdx); | |
1465 | } | ||
1466 | } | ||
1467 | }; | ||
1468 |
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64 | leafManager.foreach( kernel2 ); |
1469 | |||
1470 | // combine into a single ordered map keyed by the voxel slice key | ||
1471 | // note that this is now stored in a map ordered by voxel slice key, | ||
1472 | // so sweep slices can be processed in order | ||
1473 |
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128 | for (auto poolIt = pool.begin(); poolIt != pool.end(); ++poolIt) { |
1474 | const ThreadLocalMap& map = *poolIt; | ||
1475 |
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14408 | for (const auto& it : map) { |
1476 |
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2177654 | for (const size_t leafIdx : it.second) { |
1477 |
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4326620 | mVoxelSliceMap[it.first].emplace_back(leafIdx, NodeMaskPtrT()); |
1478 | } | ||
1479 | } | ||
1480 | } | ||
1481 | |||
1482 | // extract the voxel slice keys for random access into the map | ||
1483 |
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64 | mVoxelSliceKeys.reserve(mVoxelSliceMap.size()); |
1484 |
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14408 | for (const auto& it : mVoxelSliceMap) { |
1485 |
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14344 | mVoxelSliceKeys.push_back(it.first); |
1486 | } | ||
1487 | |||
1488 | // allocate the node masks in parallel, as the map is populated in serial | ||
1489 |
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15428 | auto kernel3 = [&](tbb::blocked_range<size_t>& range) { |
1490 |
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11268 | for (size_t i = range.begin(); i < range.end(); i++) { |
1491 | 7172 | const int64_t key = mVoxelSliceKeys[i]; | |
1492 |
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1095999 | for (auto& it : mVoxelSliceMap[key]) { |
1493 | it.second = std::make_unique<NodeMaskT>(); | ||
1494 | } | ||
1495 | } | ||
1496 | }; | ||
1497 |
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64 | tbb::parallel_for(tbb::blocked_range<size_t>(0, mVoxelSliceKeys.size()), kernel3); |
1498 | |||
1499 | // each voxel slice contains a leafIdx-nodeMask pair, | ||
1500 | // this routine populates these node masks to select only the active voxels | ||
1501 | // from the mask tree that have the same voxel slice key | ||
1502 | // TODO: a small optimization here would be to union this leaf node mask with | ||
1503 | // a pre-computed one for this particular slice pattern | ||
1504 |
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11389 | auto kernel4 = [&](tbb::blocked_range<size_t>& range) { |
1505 |
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11325 | for (size_t i = range.begin(); i < range.end(); i++) { |
1506 | 7172 | const int64_t voxelSliceKey = mVoxelSliceKeys[i]; | |
1507 | 7172 | LeafSliceArray& leafSliceArray = mVoxelSliceMap[voxelSliceKey]; | |
1508 |
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1088827 | for (LeafSlice& leafSlice : leafSliceArray) { |
1509 |
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1081655 | const size_t leafIdx = leafSlice.first; |
1510 | NodeMaskPtrT& nodeMask = leafSlice.second; | ||
1511 | const LeafT& leaf = leafManager.leaf(leafIdx); | ||
1512 | const Coord& origin = leaf.origin(); | ||
1513 | 1081655 | const int64_t leafKey = hash(origin); | |
1514 |
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308681963 | for (auto voxelIter = leaf.cbeginValueOn(); voxelIter; ++voxelIter) { |
1515 | const Index voxelIdx = voxelIter.pos(); | ||
1516 | 307600308 | const Coord ijk = LeafT::offsetToLocalCoord(voxelIdx); | |
1517 | 307600308 | const int64_t key = leafKey + hash(ijk); | |
1518 |
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307600308 | if (key == voxelSliceKey) { |
1519 | 15628404 | nodeMask->setOn(voxelIdx); | |
1520 | } | ||
1521 | } | ||
1522 | } | ||
1523 | } | ||
1524 | }; | ||
1525 |
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64 | tbb::parallel_for(tbb::blocked_range<size_t>(0, mVoxelSliceKeys.size()), kernel4); |
1526 | 64 | }// FastSweeping::SweepingKernel::computeVoxelSlices | |
1527 | |||
1528 | // Private struct for nearest neighbor grid points (very memory light!) | ||
1529 | struct NN { | ||
1530 | SdfValueT v; | ||
1531 | int n; | ||
1532 | 199635633 | inline static Coord ijk(const Coord &p, int i) { return p + FastSweeping::mOffset[i]; } | |
1533 | 1598891 | NN() : v(), n() {} | |
1534 | 375081696 | NN(const SdfAccT &a, const Coord &p, int i) : v(math::Abs(a.getValue(ijk(p,i)))), n(i) {} | |
1535 | ✗ | inline Coord operator()(const Coord &p) const { return ijk(p, n); } | |
1536 |
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93770424 | inline bool operator<(const NN &rhs) const { return v < rhs.v; } |
1537 | 31957969 | inline operator bool() const { return v < SdfValueT(1000); } | |
1538 | };// NN | ||
1539 | |||
1540 | /// @note Extending an integer field is based on the nearest-neighbor interpolation | ||
1541 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<std::is_same<ExtT, int>::value, int>::type = 0> | ||
1542 | ExtT twoNghbr(const NN& d1, const NN& d2, const SdfT& /* w */, const ExtT& v1, const ExtT& v2) const { return d1.v < d2.v ? v1 : v2; }// int implementation | ||
1543 | |||
1544 | /// @note Extending a non-integer field is based on a weighted interpolation | ||
1545 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<!std::is_same<ExtT, int>::value, int>::type = 0> | ||
1546 | 1012251 | ExtT twoNghbr(const NN& d1, const NN& d2, const SdfT& w, const ExtT& v1, const ExtT& v2) const { return ExtT(w*(d1.v*v1 + d2.v*v2)); }// non-int implementation | |
1547 | |||
1548 | /// @note Extending an integer field is based on the nearest-neighbor interpolation | ||
1549 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<std::is_same<ExtT, int>::value, int>::type = 0> | ||
1550 | ExtT threeNghbr(const NN& d1, const NN& d2, const NN& d3, const SdfT& /* w */, const ExtT& v1, const ExtT& v2, const ExtT& v3) const { | ||
1551 | math::Vec3<SdfT> d(d1.v, d2.v, d3.v); | ||
1552 | math::Vec3<ExtT> v(v1, v2, v3); | ||
1553 | return v[static_cast<int>(math::MinIndex(d))]; | ||
1554 | }// int implementation | ||
1555 | |||
1556 | /// @note Extending a non-integer field is based on a weighted interpolation | ||
1557 | template<typename ExtT = ExtValueT, typename SdfT = SdfValueT, typename std::enable_if<!std::is_same<ExtT, int>::value, int>::type = 0> | ||
1558 | 942297 | ExtT threeNghbr(const NN& d1, const NN& d2, const NN& d3, const SdfT& w, const ExtT& v1, const ExtT& v2, const ExtT& v3) const { | |
1559 | 3172041 | return ExtT(w*(d1.v*v1 + d2.v*v2 + d3.v*v3)); | |
1560 | }// non-int implementation | ||
1561 | |||
1562 | 64 | void sweep() | |
1563 | { | ||
1564 |
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64 | typename ExtGridT::TreeType *tree2 = mParent->mExtGrid ? &mParent->mExtGrid->tree() : nullptr; |
1565 |
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64 | typename ExtGridT::TreeType *tree3 = mParent->mExtGridInput ? &mParent->mExtGridInput->tree() : nullptr; |
1566 | |||
1567 | 64 | const SdfValueT h = static_cast<SdfValueT>(mParent->mSdfGrid->voxelSize()[0]); | |
1568 | 64 | const SdfValueT sqrt2h = math::Sqrt(SdfValueT(2))*h; | |
1569 | 64 | const FastSweepingDomain mode = mParent->mSweepDirection; | |
1570 | 64 | const bool isInputSdf = mParent->mIsInputSdf; | |
1571 | |||
1572 | // If we are using an extension in one direction, we need a reference grid | ||
1573 | // for the default value of the extension for the voxels that are not | ||
1574 | // intended to be updated by the sweeping algorithm. | ||
1575 |
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64 | if (tree2 && mode != FastSweepingDomain::SWEEP_ALL) assert(tree3); |
1576 | |||
1577 | 64 | const std::vector<Coord>& leafNodeOrigins = mParent->mSweepMaskLeafOrigins; | |
1578 | |||
1579 | 64 | int64_t voxelSliceIndex(0); | |
1580 | |||
1581 | 1598955 | auto kernel = [&](const tbb::blocked_range<size_t>& range) { | |
1582 | using LeafT = typename SdfGridT::TreeType::LeafNodeType; | ||
1583 | |||
1584 | 1598891 | SdfAccT acc1(mParent->mSdfGrid->tree()); | |
1585 |
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1598891 | auto acc2 = std::unique_ptr<ExtAccT>(tree2 ? new ExtAccT(*tree2) : nullptr); |
1586 |
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1598891 | auto acc3 = std::unique_ptr<ExtAccT>(tree3 ? new ExtAccT(*tree3) : nullptr); |
1587 | SdfValueT absV, sign, update, D; | ||
1588 | NN d1, d2, d3;//distance values and coordinates of closest neighbor points | ||
1589 | |||
1590 |
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1598891 | const LeafSliceArray& leafSliceArray = mVoxelSliceMap[voxelSliceIndex]; |
1591 | |||
1592 | // Solves Godunov's scheme: [x-d1]^2 + [x-d2]^2 + [x-d3]^2 = h^2 | ||
1593 | // where [X] = (X>0?X:0) and ai=min(di+1,di-1) | ||
1594 |
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3762201 | for (size_t i = range.begin(); i < range.end(); ++i) { |
1595 | |||
1596 | // iterate over all leafs in the slice and extract the leaf | ||
1597 | // and node mask for each slice pattern | ||
1598 | |||
1599 | const LeafSlice& leafSlice = leafSliceArray[i]; | ||
1600 | 2163310 | const size_t leafIdx = leafSlice.first; | |
1601 | const NodeMaskPtrT& nodeMask = leafSlice.second; | ||
1602 | |||
1603 | const Coord& origin = leafNodeOrigins[leafIdx]; | ||
1604 | |||
1605 | Coord ijk; | ||
1606 |
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35583428 | for (auto indexIter = nodeMask->beginOn(); indexIter; ++indexIter) { |
1607 | |||
1608 | // Get coordinate of center point of the FD stencil | ||
1609 | 31256808 | ijk = origin + LeafT::offsetToLocalCoord(indexIter.pos()); | |
1610 | |||
1611 | // Find the closes neighbors in the three axial directions | ||
1612 |
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31256808 | d1 = std::min(NN(acc1, ijk, 0), NN(acc1, ijk, 1)); |
1613 |
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31256808 | d2 = std::min(NN(acc1, ijk, 2), NN(acc1, ijk, 3)); |
1614 |
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31256808 | d3 = std::min(NN(acc1, ijk, 4), NN(acc1, ijk, 5)); |
1615 | |||
1616 |
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31256808 | if (!(d1 || d2 || d3)) continue;//no valid neighbors |
1617 | |||
1618 | // Get the center point of the FD stencil (assumed to be an active voxel) | ||
1619 | // Note this const_cast is normally unsafe but by design we know the tree | ||
1620 | // to be static, of floating-point type and containing active voxels only! | ||
1621 |
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30986910 | SdfValueT &value = const_cast<SdfValueT&>(acc1.getValue(ijk)); |
1622 | |||
1623 | // Extract the sign | ||
1624 |
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30986910 | sign = value >= SdfValueT(0) ? SdfValueT(1) : SdfValueT(-1); |
1625 | |||
1626 | // Absolute value | ||
1627 | absV = math::Abs(value); | ||
1628 | |||
1629 | // sort values so d1 <= d2 <= d3 | ||
1630 |
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30986910 | if (d2 < d1) std::swap(d1, d2); |
1631 |
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30986910 | if (d3 < d2) std::swap(d2, d3); |
1632 |
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30986910 | if (d2 < d1) std::swap(d1, d2); |
1633 | |||
1634 | // Test if there is a solution depending on ONE of the neighboring voxels | ||
1635 | // if d2 - d1 >= h => d2 >= d1 + h then: | ||
1636 | // (x-d1)^2=h^2 => x = d1 + h | ||
1637 | 30986910 | update = d1.v + h; | |
1638 |
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30986910 | if (update <= d2.v) { |
1639 |
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1616637 | if (update < absV) { |
1640 | 1608327 | value = sign * update; | |
1641 |
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1608327 | if (acc2) { |
1642 | // There is an assert upstream to check if mExtGridInput exists if mode != SWEEP_ALL | ||
1643 |
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554160 | ExtValueT updateExt = acc2->getValue(d1(ijk)); |
1644 |
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554160 | if (mode == FastSweepingDomain::SWEEP_GREATER_THAN_ISOVALUE) { |
1645 | ✗ | if (isInputSdf) updateExt = (value >= SdfValueT(0)) ? acc2->getValue(d1(ijk)) : acc3->getValue(ijk); | |
1646 | ✗ | else updateExt = (value <= SdfValueT(0)) ? acc2->getValue(d1(ijk)) : acc3->getValue(ijk); | |
1647 | } // SWEEP_GREATER_THAN_ISOVALUE | ||
1648 |
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554160 | else if (mode == FastSweepingDomain::SWEEP_LESS_THAN_ISOVALUE) { |
1649 | ✗ | if (isInputSdf) updateExt = (value <= SdfValueT(0)) ? acc2->getValue(d1(ijk)) : acc3->getValue(ijk); | |
1650 | ✗ | else updateExt = (value >= SdfValueT(0)) ? acc2->getValue(d1(ijk)) : acc3->getValue(ijk); | |
1651 | } // SWEEP_LESS_THAN_ISOVALUE | ||
1652 |
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554160 | acc2->setValue(ijk, updateExt); |
1653 | }//update ext? | ||
1654 | }//update sdf? | ||
1655 | 1616637 | continue; | |
1656 | }// one neighbor case | ||
1657 | |||
1658 | // Test if there is a solution depending on TWO of the neighboring voxels | ||
1659 | // (x-d1)^2 + (x-d2)^2 = h^2 | ||
1660 | //D = SdfValueT(2) * h * h - math::Pow2(d1.v - d2.v);// = 2h^2-(d1-d2)^2 | ||
1661 | //if (D >= SdfValueT(0)) {// non-negative discriminant | ||
1662 |
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29370273 | if (d2.v <= sqrt2h + d1.v) { |
1663 |
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29370273 | D = SdfValueT(2) * h * h - math::Pow2(d1.v - d2.v);// = 2h^2-(d1-d2)^2 |
1664 |
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29370273 | update = SdfValueT(0.5) * (d1.v + d2.v + std::sqrt(D)); |
1665 |
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29370273 | if (update > d2.v && update <= d3.v) { |
1666 |
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3329127 | if (update < absV) { |
1667 | 3046319 | value = sign * update; | |
1668 |
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3046319 | if (acc2) { |
1669 | 1012251 | d1.v -= update; | |
1670 | 1012251 | d2.v -= update; | |
1671 | // affine combination of two neighboring extension values | ||
1672 | 1012251 | const SdfValueT w = SdfValueT(1)/(d1.v+d2.v); | |
1673 |
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1012251 | const ExtValueT v1 = acc2->getValue(d1(ijk)); |
1674 |
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1012251 | const ExtValueT v2 = acc2->getValue(d2(ijk)); |
1675 | 302835 | const ExtValueT extVal = twoNghbr(d1, d2, w, v1, v2); | |
1676 | |||
1677 | 1012251 | ExtValueT updateExt = extVal; | |
1678 |
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1012251 | if (mode == FastSweepingDomain::SWEEP_GREATER_THAN_ISOVALUE) { |
1679 | ✗ | if (isInputSdf) updateExt = (value >= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1680 | ✗ | else updateExt = (value <= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1681 | } // SWEEP_GREATER_THAN_ISOVALUE | ||
1682 |
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1012251 | else if (mode == FastSweepingDomain::SWEEP_LESS_THAN_ISOVALUE) { |
1683 | ✗ | if (isInputSdf) updateExt = (value <= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1684 | ✗ | else updateExt = (value >= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1685 | } // SWEEP_LESS_THAN_ISOVALUE | ||
1686 |
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1012251 | acc2->setValue(ijk, updateExt); |
1687 | }//update ext? | ||
1688 | }//update sdf? | ||
1689 | 3329127 | continue; | |
1690 | }//test for two neighbor case | ||
1691 | }//test for non-negative determinant | ||
1692 | |||
1693 | // Test if there is a solution depending on THREE of the neighboring voxels | ||
1694 | // (x-d1)^2 + (x-d2)^2 + (x-d3)^2 = h^2 | ||
1695 | // 3x^2 - 2(d1 + d2 + d3)x + d1^2 + d2^2 + d3^2 = h^2 | ||
1696 | // ax^2 + bx + c=0, a=3, b=-2(d1+d2+d3), c=d1^2 + d2^2 + d3^2 - h^2 | ||
1697 | 26041146 | const SdfValueT d123 = d1.v + d2.v + d3.v; | |
1698 | 26041146 | D = d123*d123 - SdfValueT(3)*(d1.v*d1.v + d2.v*d2.v + d3.v*d3.v - h * h); | |
1699 |
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26041146 | if (D >= SdfValueT(0)) {// non-negative discriminant |
1700 | 26041146 | update = SdfValueT(1.0/3.0) * (d123 + std::sqrt(D));//always passes test | |
1701 | //if (update > d3.v) {//disabled due to round-off errors | ||
1702 |
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26041146 | if (update < absV) { |
1703 | 9476280 | value = sign * update; | |
1704 |
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9476280 | if (acc2) { |
1705 | 3172041 | d1.v -= update; | |
1706 | 3172041 | d2.v -= update; | |
1707 | 3172041 | d3.v -= update; | |
1708 | // affine combination of three neighboring extension values | ||
1709 | 3172041 | const SdfValueT w = SdfValueT(1)/(d1.v+d2.v+d3.v); | |
1710 |
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3172041 | const ExtValueT v1 = acc2->getValue(d1(ijk)); |
1711 |
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3172041 | const ExtValueT v2 = acc2->getValue(d2(ijk)); |
1712 |
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3172041 | const ExtValueT v3 = acc2->getValue(d3(ijk)); |
1713 | 942297 | const ExtValueT extVal = threeNghbr(d1, d2, d3, w, v1, v2, v3); | |
1714 | |||
1715 | 3172041 | ExtValueT updateExt = extVal; | |
1716 |
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3172041 | if (mode == FastSweepingDomain::SWEEP_GREATER_THAN_ISOVALUE) { |
1717 | ✗ | if (isInputSdf) updateExt = (value >= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1718 | ✗ | else updateExt = (value <= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1719 | } // SWEEP_GREATER_THAN_ISOVALUE | ||
1720 |
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3172041 | else if (mode == FastSweepingDomain::SWEEP_LESS_THAN_ISOVALUE) { |
1721 | ✗ | if (isInputSdf) updateExt = (value <= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1722 | ✗ | else updateExt = (value >= SdfValueT(0)) ? extVal : acc3->getValue(ijk); | |
1723 | } // SWEEP_LESS_THAN_ISOVALUE | ||
1724 |
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3172041 | acc2->setValue(ijk, updateExt); |
1725 | }//update ext? | ||
1726 | }//update sdf? | ||
1727 | }//test for non-negative determinant | ||
1728 | }//loop over coordinates | ||
1729 | } | ||
1730 | }; | ||
1731 | |||
1732 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1733 | util::CpuTimer timer("Forward sweep"); | ||
1734 | #endif | ||
1735 | |||
1736 |
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14408 | for (size_t i = 0; i < mVoxelSliceKeys.size(); i++) { |
1737 | 14344 | voxelSliceIndex = mVoxelSliceKeys[i]; | |
1738 | 14344 | tbb::parallel_for(tbb::blocked_range<size_t>(0, mVoxelSliceMap[voxelSliceIndex].size()), kernel); | |
1739 | } | ||
1740 | |||
1741 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1742 | timer.restart("Backward sweeps"); | ||
1743 | #endif | ||
1744 |
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14408 | for (size_t i = mVoxelSliceKeys.size(); i > 0; i--) { |
1745 | 14344 | voxelSliceIndex = mVoxelSliceKeys[i-1]; | |
1746 | 14344 | tbb::parallel_for(tbb::blocked_range<size_t>(0, mVoxelSliceMap[voxelSliceIndex].size()), kernel); | |
1747 | } | ||
1748 | |||
1749 | #ifdef BENCHMARK_FAST_SWEEPING | ||
1750 | timer.stop(); | ||
1751 | #endif | ||
1752 | 64 | }// FastSweeping::SweepingKernel::sweep | |
1753 | |||
1754 | private: | ||
1755 | using NodeMaskT = typename SweepMaskTreeT::LeafNodeType::NodeMaskType; | ||
1756 | using NodeMaskPtrT = std::unique_ptr<NodeMaskT>; | ||
1757 | // using a unique ptr for the NodeMask allows for parallel allocation, | ||
1758 | // but makes this class not copy-constructible | ||
1759 | using LeafSlice = std::pair</*leafIdx=*/size_t, /*leafMask=*/NodeMaskPtrT>; | ||
1760 | using LeafSliceArray = std::deque<LeafSlice>; | ||
1761 | using VoxelSliceMap = std::map</*voxelSliceKey=*/int64_t, LeafSliceArray>; | ||
1762 | |||
1763 | // Private member data of SweepingKernel | ||
1764 | FastSweeping *mParent; | ||
1765 | VoxelSliceMap mVoxelSliceMap; | ||
1766 | std::vector<int64_t> mVoxelSliceKeys; | ||
1767 | };// FastSweeping::SweepingKernel | ||
1768 | |||
1769 | //////////////////////////////////////////////////////////////////////////////// | ||
1770 | |||
1771 | template<typename GridT> | ||
1772 | typename GridT::Ptr | ||
1773 | ✗ | fogToSdf(const GridT &fogGrid, | |
1774 | typename GridT::ValueType isoValue, | ||
1775 | int nIter) | ||
1776 | { | ||
1777 | ✗ | FastSweeping<GridT> fs; | |
1778 | ✗ | if (fs.initSdf(fogGrid, isoValue, /*isInputSdf*/false)) fs.sweep(nIter); | |
1779 | ✗ | return fs.sdfGrid(); | |
1780 | } | ||
1781 | |||
1782 | template<typename GridT> | ||
1783 | typename GridT::Ptr | ||
1784 | ✗ | sdfToSdf(const GridT &sdfGrid, | |
1785 | typename GridT::ValueType isoValue, | ||
1786 | int nIter) | ||
1787 | { | ||
1788 | ✗ | FastSweeping<GridT> fs; | |
1789 | ✗ | if (fs.initSdf(sdfGrid, isoValue, /*isInputSdf*/true)) fs.sweep(nIter); | |
1790 | ✗ | return fs.sdfGrid(); | |
1791 | } | ||
1792 | |||
1793 | template<typename FogGridT, typename ExtOpT, typename ExtValueT> | ||
1794 | typename FogGridT::template ValueConverter<ExtValueT>::Type::Ptr | ||
1795 | fogToExt(const FogGridT &fogGrid, | ||
1796 | const ExtOpT &op, | ||
1797 | const ExtValueT& background, | ||
1798 | typename FogGridT::ValueType isoValue, | ||
1799 | int nIter, | ||
1800 | FastSweepingDomain mode, | ||
1801 | const typename FogGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid) | ||
1802 | { | ||
1803 | FastSweeping<FogGridT, ExtValueT> fs; | ||
1804 | if (fs.initExt(fogGrid, op, background, isoValue, /*isInputSdf*/false, mode, extGrid)) | ||
1805 | fs.sweep(nIter, /*finalize*/true); | ||
1806 | return fs.extGrid(); | ||
1807 | } | ||
1808 | |||
1809 | template<typename SdfGridT, typename OpT, typename ExtValueT> | ||
1810 | typename SdfGridT::template ValueConverter<ExtValueT>::Type::Ptr | ||
1811 | sdfToExt(const SdfGridT &sdfGrid, | ||
1812 | const OpT &op, | ||
1813 | const ExtValueT &background, | ||
1814 | typename SdfGridT::ValueType isoValue, | ||
1815 | int nIter, | ||
1816 | FastSweepingDomain mode, | ||
1817 | const typename SdfGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid) | ||
1818 | { | ||
1819 | FastSweeping<SdfGridT, ExtValueT> fs; | ||
1820 | if (fs.initExt(sdfGrid, op, background, isoValue, /*isInputSdf*/true, mode, extGrid)) | ||
1821 | fs.sweep(nIter, /*finalize*/true); | ||
1822 | return fs.extGrid(); | ||
1823 | } | ||
1824 | |||
1825 | template<typename FogGridT, typename ExtOpT, typename ExtValueT> | ||
1826 | std::pair<typename FogGridT::Ptr, typename FogGridT::template ValueConverter<ExtValueT>::Type::Ptr> | ||
1827 | 1 | fogToSdfAndExt(const FogGridT &fogGrid, | |
1828 | const ExtOpT &op, | ||
1829 | const ExtValueT &background, | ||
1830 | typename FogGridT::ValueType isoValue, | ||
1831 | int nIter, | ||
1832 | FastSweepingDomain mode, | ||
1833 | const typename FogGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid) | ||
1834 | { | ||
1835 | 1 | FastSweeping<FogGridT, ExtValueT> fs; | |
1836 |
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2 | if (fs.initExt(fogGrid, op, background, isoValue, /*isInputSdf*/false, mode, extGrid)) |
1837 |
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1 | fs.sweep(nIter, /*finalize*/true); |
1838 |
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1 | return std::make_pair(fs.sdfGrid(), fs.extGrid()); |
1839 | } | ||
1840 | |||
1841 | template<typename SdfGridT, typename ExtOpT, typename ExtValueT> | ||
1842 | std::pair<typename SdfGridT::Ptr, typename SdfGridT::template ValueConverter<ExtValueT>::Type::Ptr> | ||
1843 | 4 | sdfToSdfAndExt(const SdfGridT &sdfGrid, | |
1844 | const ExtOpT &op, | ||
1845 | const ExtValueT &background, | ||
1846 | typename SdfGridT::ValueType isoValue, | ||
1847 | int nIter, | ||
1848 | FastSweepingDomain mode, | ||
1849 | const typename SdfGridT::template ValueConverter<ExtValueT>::Type::ConstPtr extGrid) | ||
1850 | { | ||
1851 | 4 | FastSweeping<SdfGridT, ExtValueT> fs; | |
1852 |
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8 | if (fs.initExt(sdfGrid, op, background, isoValue, /*isInputSdf*/true, mode, extGrid)) |
1853 |
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4 | fs.sweep(nIter, /*finalize*/true); |
1854 |
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4 | return std::make_pair(fs.sdfGrid(), fs.extGrid()); |
1855 | } | ||
1856 | |||
1857 | template<typename GridT> | ||
1858 | typename GridT::Ptr | ||
1859 | ✗ | dilateSdf(const GridT &sdfGrid, | |
1860 | int dilation, | ||
1861 | NearestNeighbors nn, | ||
1862 | int nIter, | ||
1863 | FastSweepingDomain mode) | ||
1864 | { | ||
1865 | ✗ | FastSweeping<GridT> fs; | |
1866 | ✗ | if (fs.initDilate(sdfGrid, dilation, nn, /*sweep direction*/ mode)) fs.sweep(nIter); | |
1867 | ✗ | return fs.sdfGrid(); | |
1868 | } | ||
1869 | |||
1870 | template<typename GridT, typename MaskTreeT> | ||
1871 | typename GridT::Ptr | ||
1872 | 3 | maskSdf(const GridT &sdfGrid, | |
1873 | const Grid<MaskTreeT> &mask, | ||
1874 | bool ignoreActiveTiles, | ||
1875 | int nIter) | ||
1876 | { | ||
1877 | 6 | FastSweeping<GridT> fs; | |
1878 | 3 | if (fs.initMask(sdfGrid, mask, ignoreActiveTiles)) fs.sweep(nIter); | |
1879 | 3 | return fs.sdfGrid(); | |
1880 | } | ||
1881 | |||
1882 | |||
1883 | //////////////////////////////////////// | ||
1884 | |||
1885 | |||
1886 | // Explicit Template Instantiation | ||
1887 | |||
1888 | #ifdef OPENVDB_USE_EXPLICIT_INSTANTIATION | ||
1889 | |||
1890 | #ifdef OPENVDB_INSTANTIATE_FASTSWEEPING | ||
1891 | #include <openvdb/util/ExplicitInstantiation.h> | ||
1892 | #endif | ||
1893 | |||
1894 | #define _FUNCTION(TreeT) \ | ||
1895 | Grid<TreeT>::Ptr fogToSdf(const Grid<TreeT>&, TreeT::ValueType, int) | ||
1896 | OPENVDB_REAL_TREE_INSTANTIATE(_FUNCTION) | ||
1897 | #undef _FUNCTION | ||
1898 | |||
1899 | #define _FUNCTION(TreeT) \ | ||
1900 | Grid<TreeT>::Ptr sdfToSdf(const Grid<TreeT>&, TreeT::ValueType, int) | ||
1901 | OPENVDB_REAL_TREE_INSTANTIATE(_FUNCTION) | ||
1902 | #undef _FUNCTION | ||
1903 | |||
1904 | #define _FUNCTION(TreeT) \ | ||
1905 | Grid<TreeT>::Ptr dilateSdf(const Grid<TreeT>&, int, NearestNeighbors, int, FastSweepingDomain) | ||
1906 | OPENVDB_REAL_TREE_INSTANTIATE(_FUNCTION) | ||
1907 | #undef _FUNCTION | ||
1908 | |||
1909 | #endif // OPENVDB_USE_EXPLICIT_INSTANTIATION | ||
1910 | |||
1911 | |||
1912 | } // namespace tools | ||
1913 | } // namespace OPENVDB_VERSION_NAME | ||
1914 | } // namespace openvdb | ||
1915 | |||
1916 | #endif // OPENVDB_TOOLS_FASTSWEEPING_HAS_BEEN_INCLUDED | ||
1917 |